Variant report

Variant	rs567425249
Chromosome Location	chr1:76621770-76621771
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1488	chr1:76587622-76632635	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv870621	chr1:76620313-76997071	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:76616400-76623600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr1:76619800-76646400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr1:76620400-76623800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr1:76620400-76624000	Weak transcription	Placenta Amnion	Placenta Amnion
5	chr1:76620600-76627800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr1:76620800-76622600	Weak transcription	Fetal Brain Male	brain
7	chr1:76620800-76627800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
8	chr1:76621000-76622200	Weak transcription	Fetal Intestine Large	intestine
9	chr1:76621000-76623000	Weak transcription	HUVEC	blood vessel
10	chr1:76621000-76625000	Weak transcription	Spleen	Spleen
11	chr1:76621000-76625200	Weak transcription	Primary T cells from cord blood	blood
12	chr1:76621000-76626000	Weak transcription	Fetal Intestine Small	intestine
13	chr1:76621000-76627000	Weak transcription	Fetal Muscle Leg	muscle
14	chr1:76621000-76627600	Weak transcription	Fetal Lung	lung
15	chr1:76621000-76630600	Weak transcription	Psoas Muscle	Psoas
16	chr1:76621000-76630800	Weak transcription	Primary B cells from cord blood	blood
17	chr1:76621600-76621800	Enhancers	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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