The 2.0 version of rSNPBase

Variant report

Variant rs567500308
Chromosome Location chr13:30984561-30984562
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30982600-30995200 Weak transcription HSMMtube muscle
2 chr13:30983000-30985000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr13:30983000-30985000 Enhancers HSMM muscle
4 chr13:30983000-30985000 Enhancers NHDF-Ad bronchial
5 chr13:30983000-30985400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr13:30983000-30989000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr13:30983200-30984600 Enhancers Fetal Muscle Leg muscle
8 chr13:30983200-30984800 Enhancers Muscle Satellite Cultured Cells --
9 chr13:30983200-30985000 Enhancers NHEK skin
10 chr13:30983200-30985600 Enhancers Osteobl bone
11 chr13:30983200-30987800 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr13:30983200-30989400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr13:30983200-30989400 Weak transcription Primary T helper cells fromperipheralblood blood
14 chr13:30983200-30995600 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr13:30983400-30984600 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr13:30983400-30984600 Weak transcription Right Ventricle heart
17 chr13:30983400-30984800 Enhancers Breast Myoepithelial Primary Cells Breast
18 chr13:30983400-30984800 Enhancers Primary monocytes fromperipheralblood blood
19 chr13:30983400-30985000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr13:30983400-30986400 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr13:30983400-30987600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr13:30983400-30987800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr13:30983600-30984800 Enhancers Colon Smooth Muscle Colon
24 chr13:30983600-30985000 Enhancers Primary B cells from cord blood blood
25 chr13:30983600-30987400 Weak transcription Spleen Spleen
26 chr13:30983800-30984600 Enhancers Monocytes-CD14+_RO01746 blood
27 chr13:30983800-30984800 Enhancers Hela-S3 cervix
28 chr13:30983800-30985000 Enhancers Primary neutrophils fromperipheralblood blood
29 chr13:30983800-30985800 Weak transcription Aorta Aorta
30 chr13:30983800-30986200 Weak transcription Primary B cells from peripheral blood blood
31 chr13:30984000-30984600 Enhancers Fetal Muscle Trunk muscle
32 chr13:30984000-30984800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr13:30984000-30984800 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr13:30984000-30985600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr13:30984000-30987800 Weak transcription Primary hematopoietic stem cells blood
36 chr13:30984000-30995000 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr13:30984200-30984800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
38 chr13:30984200-30984800 Weak transcription NHLF lung
39 chr13:30984200-30985000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr13:30984200-30988800 Weak transcription Fetal Thymus thymus
41 chr13:30984400-30985200 Enhancers Adipose Nuclei Adipose
42 chr13:30984400-30989600 Weak transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015