The 2.0 version of rSNPBase

Variant report

Variant rs567544242
Chromosome Location chr13:97771818-97771819
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:97762800-97773600 Weak transcription K562 blood
2 chr13:97766800-97772200 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr13:97766800-97778200 Weak transcription Esophagus oesophagus
4 chr13:97767800-97772000 Enhancers Rectal Smooth Muscle rectum
5 chr13:97767800-97776600 Weak transcription Gastric stomach
6 chr13:97767800-97777200 Weak transcription Fetal Kidney kidney
7 chr13:97768000-97772800 Weak transcription NHDF-Ad bronchial
8 chr13:97768000-97773000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr13:97768000-97773000 Weak transcription A549 lung
10 chr13:97768000-97777000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr13:97768600-97774000 Weak transcription Placenta Placenta
12 chr13:97768800-97772200 Weak transcription Brain Substantia Nigra brain
13 chr13:97768800-97775600 Weak transcription Lung lung
14 chr13:97768800-97776200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr13:97769000-97772200 Weak transcription Brain Inferior Temporal Lobe brain
16 chr13:97769000-97778400 Weak transcription Right Atrium heart
17 chr13:97769200-97772200 Weak transcription Brain Angular Gyrus brain
18 chr13:97769200-97772600 Weak transcription Brain Cingulate Gyrus brain
19 chr13:97769200-97772600 Weak transcription HSMMtube muscle
20 chr13:97769200-97772800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr13:97769200-97772800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr13:97769200-97772800 Weak transcription NH-A brain
23 chr13:97769200-97774800 Weak transcription Brain Hippocampus Middle brain
24 chr13:97769400-97772400 Weak transcription Muscle Satellite Cultured Cells --
25 chr13:97769400-97772400 Weak transcription Osteobl bone
26 chr13:97769400-97772600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr13:97769400-97772800 Weak transcription Brain Anterior Caudate brain
28 chr13:97769400-97772800 Weak transcription NHLF lung
29 chr13:97769600-97772600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr13:97769600-97773000 Weak transcription HSMM muscle
31 chr13:97769600-97774200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr13:97770000-97772200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr13:97770000-97772400 Weak transcription Placenta Amnion Placenta Amnion
34 chr13:97770000-97772800 Weak transcription Hela-S3 cervix
35 chr13:97770000-97774800 Weak transcription Stomach Mucosa stomach
36 chr13:97770200-97773800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr13:97770200-97774000 Weak transcription Right Ventricle heart
38 chr13:97770200-97775000 Weak transcription Aorta Aorta
39 chr13:97770200-97775000 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr13:97770200-97775000 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr13:97770200-97776600 Weak transcription Fetal Stomach stomach
42 chr13:97770200-97777200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr13:97770400-97774000 Weak transcription Fetal Heart heart
44 chr13:97770400-97777000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr13:97770600-97772400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr13:97770600-97774600 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr13:97770800-97774000 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr13:97770800-97775000 Weak transcription Ovary ovary
49 chr13:97770800-97775000 Weak transcription Stomach Smooth Muscle stomach
50 chr13:97770800-97776200 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015