The 2.0 version of rSNPBase

Variant report

Variant rs56758622
Chromosome Location chr4:95486284-95486285
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:95458200-95488800 Weak transcription Stomach Smooth Muscle stomach
2 chr4:95463000-95487800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr4:95470000-95489200 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr4:95470600-95489200 Weak transcription Small Intestine intestine
5 chr4:95479800-95491400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr4:95479800-95496800 Weak transcription Fetal Muscle Leg muscle
7 chr4:95480600-95488000 Enhancers Liver Liver
8 chr4:95481200-95494600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr4:95481400-95496800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr4:95481400-95496800 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr4:95483000-95486400 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr4:95483200-95488400 Enhancers HUVEC blood vessel
13 chr4:95483200-95488800 Weak transcription K562 blood
14 chr4:95483400-95491600 Weak transcription Rectal Smooth Muscle rectum
15 chr4:95483400-95491800 Weak transcription Brain Anterior Caudate brain
16 chr4:95483400-95496600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr4:95483400-95496800 Weak transcription NHEK skin
18 chr4:95483400-95524400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr4:95483600-95496200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr4:95483800-95488800 Weak transcription Duodenum Mucosa Duodenum
21 chr4:95483800-95491800 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr4:95483800-95496600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr4:95483800-95496800 Weak transcription Gastric stomach
24 chr4:95483800-95497000 Weak transcription HMEC breast
25 chr4:95484000-95488600 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr4:95484000-95488800 Weak transcription Adipose Nuclei Adipose
27 chr4:95484000-95488800 Weak transcription Colon Smooth Muscle Colon
28 chr4:95484000-95489000 Weak transcription Stomach Mucosa stomach
29 chr4:95484000-95491400 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr4:95484000-95495600 Weak transcription NH-A brain
31 chr4:95484000-95496600 Weak transcription HSMMtube muscle
32 chr4:95484000-95507400 Weak transcription Hela-S3 cervix
33 chr4:95484600-95496800 Weak transcription HSMM muscle
34 chr4:95484800-95488800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr4:95485000-95486400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr4:95485400-95488200 Enhancers Fetal Heart heart
37 chr4:95485600-95486400 Enhancers Skeletal Muscle Male skeletal muscle
38 chr4:95485600-95488800 Weak transcription Right Atrium heart
39 chr4:95485600-95496600 Weak transcription Ovary ovary
40 chr4:95485800-95487200 Weak transcription A549 lung
41 chr4:95485800-95488000 Enhancers HepG2 liver
42 chr4:95485800-95488600 Weak transcription Osteobl bone
43 chr4:95485800-95488800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr4:95485800-95488800 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr4:95485800-95495200 Weak transcription Muscle Satellite Cultured Cells --
46 chr4:95485800-95496800 Weak transcription Psoas Muscle Psoas
47 chr4:95485800-95496800 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr4:95486000-95489000 Weak transcription Fetal Intestine Small intestine
49 chr4:95486000-95496800 Weak transcription Aorta Aorta
50 chr4:95486200-95486600 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015