Variant report

Variant	rs567640577
Chromosome Location	chr14:77736425-77736426
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:77656618..77658691-chr14:77734209..77736747,2	MCF-7	breast:
2	chr14:77734678..77737344-chr14:77778616..77780685,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000009830	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431017	chr14:76938089-77854647	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	107 gene(s)	inside rSNPs	diseases
2	nsv1361	chr14:77707417-77753024	Flanking Bivalent TSS/Enh Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers Genic enhancers ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	12 gene(s)	inside rSNPs	diseases
3	nsv902104	chr14:77720741-77756321	Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	10 gene(s)	inside rSNPs	diseases
4	esv3373764	chr14:77735746-77736439	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Active TSS Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:77735400-77736600	Bivalent Enhancer	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr14:77735400-77737400	Enhancers	Dnd41	blood
3	chr14:77735600-77736600	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr14:77735600-77736800	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr14:77735600-77737200	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle
6	chr14:77735600-77738000	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
7	chr14:77735600-77738000	Enhancers	Pancreas	Pancrea
8	chr14:77735800-77737000	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr14:77735800-77737000	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr14:77736000-77737800	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
11	chr14:77736000-77738000	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
12	chr14:77736200-77736600	Bivalent Enhancer	HepG2	liver
13	chr14:77736200-77737000	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr14:77736200-77737800	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
15	chr14:77736400-77736600	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
16	chr14:77736400-77736600	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
17	chr14:77736400-77736600	Flanking Bivalent TSS/Enh	iPS DF 6.9 Cell Line	embryonic stem cell
18	chr14:77736400-77736600	Bivalent/Poised TSS	Fetal Brain Female	brain
19	chr14:77736400-77736800	Enhancers	Primary hematopoietic stem cells	blood
20	chr14:77736400-77736800	Bivalent Enhancer	Brain Germinal Matrix	brain
21	chr14:77736400-77736800	Bivalent Enhancer	Fetal Stomach	stomach
22	chr14:77736400-77736800	Bivalent Enhancer	HMEC	breast
23	chr14:77736400-77737000	Bivalent Enhancer	Primary hematopoietic stem cells short term culture	blood
24	chr14:77736400-77737200	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
25	chr14:77736400-77737200	Weak transcription	Pancreatic Islets	Pancreatic Islet
26	chr14:77736400-77737400	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
27	chr14:77736400-77738000	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
28	chr14:77736400-77738000	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell

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