The 2.0 version of rSNPBase

Variant report

Variant rs567643583
Chromosome Location chr11:45983397-45983398
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:45952400-45996200 Weak transcription Stomach Mucosa stomach
2 chr11:45953000-45988600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr11:45957200-46004400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr11:45957200-46004400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr11:45957600-45986400 Weak transcription HMEC breast
6 chr11:45957800-45986400 Weak transcription NHEK skin
7 chr11:45960400-45986600 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr11:45967600-46004600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr11:45968000-45985800 Weak transcription K562 blood
10 chr11:45969800-45983400 Weak transcription Fetal Heart heart
11 chr11:45970400-45985200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr11:45970600-45983400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr11:45970600-45986200 Weak transcription NHLF lung
14 chr11:45970600-45986600 Weak transcription Pancreas Pancrea
15 chr11:45970600-45986800 Weak transcription HepG2 liver
16 chr11:45970800-45989200 Weak transcription Placenta Amnion Placenta Amnion
17 chr11:45970800-45990400 Weak transcription NHDF-Ad bronchial
18 chr11:45971000-45983400 Weak transcription Right Ventricle heart
19 chr11:45971000-45985800 Weak transcription Rectal Smooth Muscle rectum
20 chr11:45971000-45986800 Weak transcription Gastric stomach
21 chr11:45971000-45990000 Weak transcription Colonic Mucosa Colon
22 chr11:45971000-45990600 Weak transcription H9 Cell Line embryonic stem cell
23 chr11:45971000-45992400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr11:45971200-45985200 Weak transcription H1 Cell Line embryonic stem cell
25 chr11:45971200-45986600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr11:45971200-45989600 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr11:45971200-45992400 Weak transcription Small Intestine intestine
28 chr11:45971400-45990800 Weak transcription HUVEC blood vessel
29 chr11:45971600-45986600 Weak transcription Fetal Brain Male brain
30 chr11:45971800-45991400 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr11:45972000-45986600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr11:45972000-45986800 Weak transcription Aorta Aorta
33 chr11:45972000-45989000 Weak transcription Brain Cingulate Gyrus brain
34 chr11:45972200-45992400 Weak transcription Psoas Muscle Psoas
35 chr11:45972400-45983400 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr11:45972600-45986600 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr11:45972800-45986000 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr11:45972800-45988600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr11:45974000-45986600 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr11:45974200-45986000 Weak transcription Colon Smooth Muscle Colon
41 chr11:45975000-45983600 Weak transcription NH-A brain
42 chr11:45975000-45985400 Weak transcription Duodenum Mucosa Duodenum
43 chr11:45975000-45986800 Weak transcription Brain Inferior Temporal Lobe brain
44 chr11:45975000-45989000 Weak transcription iPS-18 Cell Line embryonic stem cell
45 chr11:45975200-45985800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr11:45975200-45985800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr11:45975200-45986400 Weak transcription Muscle Satellite Cultured Cells --
48 chr11:45975200-45986400 Weak transcription Stomach Smooth Muscle stomach
49 chr11:45975200-45988600 Weak transcription Brain Substantia Nigra brain
50 chr11:45975200-45991600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015