Variant report

Variant	rs56768513
Chromosome Location	chr11:64183832-64183833
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10219174	1.00[EUR][1000 genomes]
rs11823402	1.00[EUR][1000 genomes]
rs12269866	1.00[EUR][1000 genomes]
rs12275514	1.00[EUR][1000 genomes]
rs12278771	1.00[EUR][1000 genomes]
rs558073	1.00[EUR][1000 genomes]
rs71526475	1.00[EUR][1000 genomes]
rs71579878	1.00[EUR][1000 genomes]
rs71581770	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832187	chr11:64121969-64312300	Genic enhancers Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	esv3373822	chr11:64182426-64184924	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:64178000-64184200	Weak transcription	Right Atrium	heart
2	chr11:64182400-64184000	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr11:64182400-64184000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr11:64182800-64196000	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr11:64183600-64184000	Enhancers	Gastric	stomach
6	chr11:64183600-64186000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr11:64183800-64186600	Weak transcription	Placenta	Placenta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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