| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv869425 |
chr12:59746898-60479741 |
Weak transcription Enhancers ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
22 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv516042 |
chr12:60354307-60459370 |
Flanking Active TSS Enhancers Strong transcription Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv899136 |
chr12:60373244-60483607 |
Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv559103 |
chr12:60383069-60483607 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv1048137 |
chr12:60432594-60515455 |
Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv428591 |
chr12:60446360-60631044 |
Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
5 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
esv3343678 |
chr12:60452835-60454933 |
Enhancers Weak transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
