Variant report

Variant	rs567828424
Chromosome Location	chr4:147055751-147055752
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv461674	chr4:147047072-147143572	Weak transcription Active TSS Genic enhancers Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv595650	chr4:147047072-147143572	Genic enhancers Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv1018859	chr4:147055618-147138397	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:147052600-147056000	Weak transcription	Right Atrium	heart
2	chr4:147054600-147055800	Weak transcription	Osteobl	bone
3	chr4:147054600-147056600	Enhancers	Fetal Brain Male	brain
4	chr4:147055200-147056600	Enhancers	Fetal Brain Female	brain
5	chr4:147055200-147057400	Enhancers	Breast Myoepithelial Primary Cells	Breast
6	chr4:147055200-147057400	Enhancers	Cortex derived primary cultured neurospheres	brain
7	chr4:147055400-147055800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
8	chr4:147055400-147056200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr4:147055400-147056200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr4:147055400-147056600	Enhancers	HMEC	breast
11	chr4:147055400-147056800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr4:147055600-147056600	Enhancers	Esophagus	oesophagus
13	chr4:147055600-147056800	Enhancers	Brain Germinal Matrix	brain
14	chr4:147055600-147057200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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