The 2.0 version of rSNPBase

Variant report

Variant rs56783261
Chromosome Location chr3:24524835-24524836
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:24499600-24526800 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr3:24509600-24531000 Weak transcription Fetal Lung lung
3 chr3:24515600-24533200 Weak transcription Stomach Mucosa stomach
4 chr3:24517800-24527000 Weak transcription Lung lung
5 chr3:24517800-24527000 Weak transcription Stomach Smooth Muscle stomach
6 chr3:24517800-24527000 Weak transcription Hela-S3 cervix
7 chr3:24517800-24528600 Weak transcription Placenta Amnion Placenta Amnion
8 chr3:24517800-24529000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr3:24519200-24526800 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr3:24519400-24525200 Weak transcription K562 blood
11 chr3:24519400-24525400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr3:24519400-24527400 Weak transcription Right Atrium heart
13 chr3:24519400-24532800 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr3:24520400-24525200 Weak transcription Primary monocytes fromperipheralblood blood
15 chr3:24520400-24525400 Weak transcription H9 Cell Line embryonic stem cell
16 chr3:24520400-24529800 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr3:24521400-24525600 Enhancers Skeletal Muscle Male skeletal muscle
18 chr3:24521400-24527400 Weak transcription Pancreas Pancrea
19 chr3:24521800-24525200 Weak transcription Aorta Aorta
20 chr3:24522000-24525200 Weak transcription Right Ventricle heart
21 chr3:24522000-24525400 Enhancers Fetal Intestine Small intestine
22 chr3:24522400-24525000 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr3:24522400-24525200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr3:24522400-24525200 Weak transcription Monocytes-CD14+_RO01746 blood
25 chr3:24522600-24526600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr3:24522600-24528600 Weak transcription Adipose Nuclei Adipose
27 chr3:24522800-24525200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr3:24523000-24534000 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr3:24523800-24527400 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr3:24524000-24525400 Weak transcription iPS-15b Cell Line embryonic stem cell
31 chr3:24524000-24527000 Weak transcription HMEC breast
32 chr3:24524000-24529000 Weak transcription Rectal Smooth Muscle rectum
33 chr3:24524000-24529400 Weak transcription Ovary ovary
34 chr3:24524200-24525200 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr3:24524200-24525200 Weak transcription Liver Liver
36 chr3:24524200-24525200 Weak transcription Gastric stomach
37 chr3:24524200-24525200 Weak transcription Psoas Muscle Psoas
38 chr3:24524200-24525200 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr3:24524200-24526800 Weak transcription Left Ventricle heart
40 chr3:24524400-24526200 Weak transcription Fetal Intestine Large intestine
41 chr3:24524400-24527000 Weak transcription HepG2 liver
42 chr3:24524400-24527200 Weak transcription Colon Smooth Muscle Colon
43 chr3:24524600-24525000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015