Variant report

Variant	rs567891046
Chromosome Location	chr4:91156359-91156360
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1012406	chr4:90167781-91166787	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
2	nsv949454	chr4:90272120-91156917	Flanking Bivalent TSS/Enh Active TSS Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
3	nsv470053	chr4:90879613-91439573	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
4	nsv879537	chr4:90883047-91165346	Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
5	nsv931074	chr4:90970476-91753697	Enhancers Strong transcription Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
6	nsv830006	chr4:90971656-91186340	Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
7	nsv1007826	chr4:91049593-91438961	Enhancers Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
8	nsv537177	chr4:91049593-91438961	Bivalent/Poised TSS Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
9	nsv999065	chr4:91049593-91520073	Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
10	nsv1007804	chr4:91122398-91217331	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
11	nsv594822	chr4:91130734-91194806	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
12	nsv879540	chr4:91156104-91212092	Weak transcription Active TSS Enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
13	nsv879541	chr4:91156104-91253355	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:91155000-91158800	Weak transcription	Fetal Intestine Small	intestine
2	chr4:91155800-91156400	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr4:91155800-91156600	Active TSS	Brain Germinal Matrix	brain
4	chr4:91155800-91156600	Enhancers	Fetal Heart	heart
5	chr4:91156000-91156400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr4:91156000-91156400	Enhancers	Cortex derived primary cultured neurospheres	brain
7	chr4:91156000-91156400	Active TSS	Brain Angular Gyrus	brain
8	chr4:91156000-91156400	Active TSS	Brain Hippocampus Middle	brain
9	chr4:91156000-91156400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
10	chr4:91156000-91156400	Enhancers	Fetal Brain Male	brain
11	chr4:91156000-91156400	Active TSS	Pancreatic Islets	Pancreatic Islet
12	chr4:91156000-91156600	Active TSS	Brain Anterior Caudate	brain
13	chr4:91156000-91156600	Active TSS	Brain Inferior Temporal Lobe	brain
14	chr4:91156000-91156600	Active TSS	Right Atrium	heart
15	chr4:91156000-91156600	Active TSS	Right Ventricle	heart
16	chr4:91156000-91156600	Enhancers	NHEK	skin
17	chr4:91156200-91156400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr4:91156200-91156400	Enhancers	Fetal Kidney	kidney
19	chr4:91156200-91156400	Flanking Active TSS	Left Ventricle	heart
20	chr4:91156200-91156400	Flanking Active TSS	Pancreas	Pancrea
21	chr4:91156200-91156600	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr4:91156200-91156600	Flanking Active TSS	Adipose Nuclei	Adipose
23	chr4:91156200-91156600	Active TSS	Brain Cingulate Gyrus	brain
24	chr4:91156200-91156600	Flanking Active TSS	Fetal Brain Female	brain
25	chr4:91156200-91156600	Enhancers	Fetal Lung	lung

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