Variant report

Variant	rs567910608
Chromosome Location	chr10:49708655-49708656
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:49707073..49711100-chr10:49713490..49716250,3	K562	blood:
2	chr10:49707527..49709358-chr10:49712606..49714171,2	K562	blood:
3	chr10:49692340..49695073-chr10:49708069..49710836,2	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895371	chr10:49492075-50232180	Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	35 gene(s)	inside rSNPs	diseases
2	nsv895372	chr10:49576878-49933488	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
3	nsv467191	chr10:49669142-49735563	Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
4	nsv550813	chr10:49669142-49735563	Flanking Bivalent TSS/Enh Active TSS Weak transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
5	nsv550814	chr10:49705142-49735563	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
6	nsv516006	chr10:49707942-49723300	Weak transcription Strong transcription ZNF genes & repeats Enhancers Bivalent Enhancer Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:49698000-49731200	Weak transcription	Aorta	Aorta
2	chr10:49701600-49716400	Weak transcription	Right Atrium	heart
3	chr10:49702400-49718200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr10:49705400-49716600	Weak transcription	Brain Angular Gyrus	brain
5	chr10:49705600-49715600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr10:49705800-49713000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr10:49706000-49709200	Weak transcription	NHLF	lung
8	chr10:49706000-49709400	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr10:49706000-49710200	Weak transcription	Fetal Muscle Leg	muscle
10	chr10:49706000-49710600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr10:49706000-49716600	Weak transcription	HMEC	breast
12	chr10:49706000-49723400	Weak transcription	NH-A	brain
13	chr10:49706200-49709200	Weak transcription	Osteobl	bone
14	chr10:49706200-49709400	Weak transcription	Muscle Satellite Cultured Cells	--
15	chr10:49706200-49709800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr10:49706200-49712400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr10:49706200-49712400	Weak transcription	Fetal Thymus	thymus
18	chr10:49706200-49713800	Weak transcription	HSMM	muscle
19	chr10:49706200-49716400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr10:49706400-49709400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr10:49706400-49710400	Weak transcription	HSMMtube	muscle
22	chr10:49706600-49709400	Weak transcription	Ovary	ovary
23	chr10:49706800-49710000	Weak transcription	K562	blood
24	chr10:49707000-49709200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr10:49707200-49709200	Weak transcription	NHDF-Ad	bronchial
26	chr10:49707400-49709200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
27	chr10:49707400-49710000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
28	chr10:49707400-49716600	Weak transcription	Fetal Stomach	stomach
29	chr10:49707600-49710600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
30	chr10:49707600-49716600	Weak transcription	Brain Cingulate Gyrus	brain
31	chr10:49707800-49709000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
32	chr10:49707800-49709200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
33	chr10:49707800-49709800	Weak transcription	Primary hematopoietic stem cells	blood
34	chr10:49708400-49710800	Enhancers	GM12878-XiMat	blood

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