Variant report

Variant	rs567918791
Chromosome Location	chr4:121842839-121842840
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:121836736..121838271-chr4:121841875..121843483,2	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv998094	chr4:121504565-122374203	Weak transcription Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
2	nsv1009395	chr4:121841442-122557363	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
3	nsv537235	chr4:121841442-122557363	Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
4	esv3405799	chr4:121842552-121845050	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:119 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:121841800-121843000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr4:121841800-121843000	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr4:121841800-121844600	Active TSS	iPS-20b Cell Line	embryonic stem cell
4	chr4:121842200-121843000	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
5	chr4:121842200-121843000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr4:121842400-121843000	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
7	chr4:121842400-121843000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
8	chr4:121842400-121843000	Flanking Active TSS	Muscle Satellite Cultured Cells	--
9	chr4:121842400-121843000	Flanking Active TSS	HMEC	breast
10	chr4:121842400-121843000	Flanking Active TSS	NH-A	brain
11	chr4:121842400-121843200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr4:121842400-121843200	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr4:121842400-121844400	Active TSS	ES-I3 Cell Line	embryonic stem cell
14	chr4:121842400-121844400	Active TSS	A549	lung
15	chr4:121842400-121844600	Active TSS	iPS-15b Cell Line	embryonic stem cell
16	chr4:121842400-121844600	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr4:121842400-121844800	Active TSS	Pancreatic Islets	Pancreatic Islet
18	chr4:121842600-121843000	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr4:121842600-121843000	Flanking Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr4:121842600-121843000	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr4:121842600-121843000	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
22	chr4:121842600-121843000	Bivalent Enhancer	Primary neutrophils fromperipheralblood	blood
23	chr4:121842600-121843000	Flanking Bivalent TSS/Enh	Primary T cells from cord blood	blood
24	chr4:121842600-121843000	Bivalent Enhancer	Primary T helper 17 cells PMA-I stimulated	--
25	chr4:121842600-121843000	Bivalent Enhancer	Primary T regulatory cells fromperipheralblood	blood
26	chr4:121842600-121843000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
27	chr4:121842600-121843000	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr4:121842600-121843000	Flanking Active TSS	Adipose Nuclei	Adipose
29	chr4:121842600-121843000	Flanking Active TSS	Brain Hippocampus Middle	brain
30	chr4:121842600-121843000	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
31	chr4:121842600-121843000	Flanking Active TSS	Fetal Brain Male	brain
32	chr4:121842600-121843000	Flanking Active TSS	Fetal Brain Female	brain
33	chr4:121842600-121843000	Flanking Active TSS	Fetal Lung	lung
34	chr4:121842600-121843000	Enhancers	Placenta	Placenta
35	chr4:121842600-121843000	Flanking Active TSS	Fetal Stomach	stomach
36	chr4:121842600-121843000	Bivalent Enhancer	Fetal Thymus	thymus
37	chr4:121842600-121843000	Flanking Active TSS	Pancreas	Pancrea
38	chr4:121842600-121843000	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
39	chr4:121842600-121843000	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
40	chr4:121842600-121843000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
41	chr4:121842600-121843000	Flanking Active TSS	Stomach Mucosa	stomach
42	chr4:121842600-121843000	Flanking Active TSS	HSMMtube	muscle
43	chr4:121842600-121843200	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
44	chr4:121842600-121843200	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
45	chr4:121842600-121843200	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
46	chr4:121842600-121843200	Flanking Active TSS	HUVEC	blood vessel
47	chr4:121842600-121843200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
48	chr4:121842600-121843200	Flanking Active TSS	Osteobl	bone
49	chr4:121842600-121843400	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
50	chr4:121842600-121844200	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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