Variant report

Variant	rs568025551
Chromosome Location	chr15:72570763-72570764
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr15:72565313..72567062-chr15:72569631..72571154,2	K562	blood:
2	chr15:72518424..72531344-chr15:72562525..72571046,23	K562	blood:
3	chr15:72565043..72567062-chr15:72568655..72571579,4	K562	blood:

Variant related genes	Relation type
ENSG00000067225	Chromatin interaction
ENSG00000137817	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431395	chr15:72266174-72701777	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
2	nsv530817	chr15:72350885-72773374	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	173 gene(s)	inside rSNPs	diseases
3	esv3430860	chr15:72373723-72849907	Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	172 gene(s)	inside rSNPs	diseases
4	nsv1601	chr15:72549885-72585176	Flanking Active TSS Weak transcription Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
5	esv3494908	chr15:72570698-72576646	Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:72565800-72572600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr15:72566000-72571000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr15:72566000-72573600	Weak transcription	Brain Anterior Caudate	brain
4	chr15:72566000-72573600	Weak transcription	Brain Substantia Nigra	brain
5	chr15:72566000-72575800	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr15:72566000-72576400	Weak transcription	Colon Smooth Muscle	Colon
7	chr15:72566000-72577800	Weak transcription	Fetal Intestine Small	intestine
8	chr15:72566000-72582400	Weak transcription	Stomach Smooth Muscle	stomach
9	chr15:72566000-72611400	Weak transcription	Right Ventricle	heart
10	chr15:72566200-72573000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
11	chr15:72566200-72573600	Weak transcription	Brain Hippocampus Middle	brain
12	chr15:72566200-72577000	Weak transcription	Ovary	ovary
13	chr15:72566200-72577600	Weak transcription	Brain Angular Gyrus	brain
14	chr15:72566200-72578400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
15	chr15:72566200-72579200	Weak transcription	Primary T cells from cord blood	blood
16	chr15:72566400-72573600	Weak transcription	K562	blood
17	chr15:72567000-72611800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
18	chr15:72567800-72581400	Weak transcription	Fetal Muscle Leg	muscle
19	chr15:72569000-72576800	Weak transcription	HSMMtube	muscle
20	chr15:72569200-72574000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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