Variant report

Variant	rs568190574
Chromosome Location	chr4:28513239-28513240
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1010133	chr4:28273244-28642942	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1014938	chr4:28277683-28642942	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	esv3523834	chr4:28511856-28513344	Weak transcription	n/a	n/a	inside rSNPs	diseases
4	esv3523835	chr4:28511874-28513398	Weak transcription	n/a	n/a	inside rSNPs	diseases
5	esv3523836	chr4:28511887-28513301	Weak transcription	n/a	n/a	inside rSNPs	diseases
6	esv3464966	chr4:28511898-28513300	Weak transcription	n/a	n/a	inside rSNPs	diseases
7	esv3464968	chr4:28511900-28513285	Weak transcription	n/a	n/a	inside rSNPs	diseases
8	esv3464967	chr4:28511911-28513252	Weak transcription	n/a	n/a	inside rSNPs	diseases
9	esv3464965	chr4:28511928-28513285	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:28500000-28520400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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