Variant report

Variant	rs568278643
Chromosome Location	chr3:156091195-156091196
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:156090883..156092603-chr3:156093278..156096049,2	K562	blood:
2	chr3:156089108..156092383-chr3:156093518..156096511,3	K562	blood:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014755	chr3:155889430-156411894	Flanking Active TSS Strong transcription Weak transcription Enhancers Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
2	esv1793356	chr3:156079516-156093505	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv1803569	chr3:156081835-156093273	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv1813303	chr3:156081835-156093505	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv1814153	chr3:156081835-156093505	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3461206	chr3:156090258-156095656	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3505414	chr3:156091008-156094806	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:156076400-156091600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr3:156088600-156096000	Weak transcription	Placenta	Placenta
3	chr3:156089600-156091200	Enhancers	Rectal Smooth Muscle	rectum
4	chr3:156089600-156091600	Enhancers	Brain Hippocampus Middle	brain
5	chr3:156089600-156092600	Enhancers	HSMMtube	muscle
6	chr3:156089800-156091600	Weak transcription	Colon Smooth Muscle	Colon
7	chr3:156089800-156092400	Enhancers	HUES64 Cell Line	embryonic stem cell
8	chr3:156090000-156092200	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr3:156090000-156092200	Enhancers	iPS-18 Cell Line	embryonic stem cell
10	chr3:156090200-156091600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
11	chr3:156090200-156091600	Enhancers	Brain Substantia Nigra	brain
12	chr3:156090200-156091800	Enhancers	H9 Cell Line	embryonic stem cell
13	chr3:156090200-156091800	Enhancers	Brain Cingulate Gyrus	brain
14	chr3:156090200-156092000	Enhancers	H1 Cell Line	embryonic stem cell
15	chr3:156090200-156092000	Enhancers	HUES6 Cell Line	embryonic stem cell
16	chr3:156090200-156092200	Enhancers	iPS-20b Cell Line	embryonic stem cell
17	chr3:156090200-156092400	Enhancers	ES-I3 Cell Line	embryonic stem cell
18	chr3:156090600-156091200	Enhancers	Brain Inferior Temporal Lobe	brain
19	chr3:156090600-156091800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
20	chr3:156090600-156091800	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
21	chr3:156090800-156091200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
22	chr3:156090800-156094000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr3:156090800-156100600	Weak transcription	Fetal Muscle Leg	muscle

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