Variant report

Variant	rs56832501
Chromosome Location	chr7:14093194-14093195
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs57629796	1.00[AMR][1000 genomes]
rs57945458	1.00[AMR][1000 genomes]
rs58038849	1.00[AMR][1000 genomes]
rs59026260	1.00[AMR][1000 genomes]
rs60121356	0.84[AFR][1000 genomes]
rs60121963	1.00[AMR][1000 genomes]
rs60254140	1.00[AMR][1000 genomes]
rs6942961	1.00[AMR][1000 genomes]
rs73263807	1.00[AMR][1000 genomes]
rs73263818	1.00[AMR][1000 genomes]
rs73280542	1.00[AMR][1000 genomes]
rs73280549	1.00[AMR][1000 genomes]
rs73280574	1.00[AMR][1000 genomes]
rs73679257	1.00[AMR][1000 genomes]
rs73679261	1.00[AMR][1000 genomes]
rs7781184	1.00[AMR][1000 genomes]
rs7797543	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1019873	chr7:13707148-14133367	Bivalent Enhancer Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv949467	chr7:13938464-14279074	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
4	nsv1015312	chr7:14092753-14266917	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14091800-14097400	Weak transcription	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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