Variant report

Variant	rs568376538
Chromosome Location	chr6:150287094-150287095
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886764	chr6:150114745-150393683	Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
2	nsv517022	chr6:150145001-150426272	Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Strong transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
3	nsv886765	chr6:150198491-150288722	Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
4	nsv970175	chr6:150286661-150300237	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS Enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150286800-150287200	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
2	chr6:150286800-150287200	Flanking Bivalent TSS/Enh	HUES48 Cell Line	embryonic stem cell
3	chr6:150286800-150287200	Bivalent Enhancer	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr6:150286800-150287200	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr6:150286800-150287200	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
6	chr6:150286800-150287200	Bivalent Enhancer	Right Ventricle	heart
7	chr6:150286800-150287200	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle
8	chr6:150286800-150294800	Weak transcription	HSMMtube	muscle
9	chr6:150287000-150287200	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
10	chr6:150287000-150287200	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
11	chr6:150287000-150287200	Bivalent/Poised TSS	Primary T killer naive cells fromperipheralblood	blood
12	chr6:150287000-150290600	Weak transcription	Spleen	Spleen

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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