Variant report

Variant	rs568410896
Chromosome Location	chr7:79742828-79742829
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429785	chr7:79589749-80177049	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	nsv1027494	chr7:79693976-79760332	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	esv2566379	chr7:79741292-79742917	Enhancers Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
4	esv3363960	chr7:79741416-79743464	Active TSS Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
5	esv3437197	chr7:79741916-79742914	Weak transcription Enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:79741200-79743000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr7:79741200-79743000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr7:79742800-79743000	Enhancers	Brain Cingulate Gyrus	brain
4	chr7:79742800-79743000	Enhancers	Brain Hippocampus Middle	brain
5	chr7:79742800-79743200	Enhancers	Brain Angular Gyrus	brain
6	chr7:79742800-79743600	Active TSS	Brain Substantia Nigra	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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