Variant report

Variant	rs568563504
Chromosome Location	chr9:94500482-94500483
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045332	chr9:94352661-94656016	Active TSS Bivalent Enhancer Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1047426	chr9:94363211-94758114	Weak transcription Bivalent Enhancer Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
3	nsv531631	chr9:94373847-94633213	Weak transcription Enhancers Bivalent Enhancer Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
4	nsv6612	chr9:94490644-94535738	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv1036176	chr9:94500213-94639367	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
6	nsv540171	chr9:94500213-94639367	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:94477200-94533000	Weak transcription	Fetal Kidney	kidney
2	chr9:94483400-94501600	Weak transcription	Rectal Mucosa Donor 29	rectum
3	chr9:94483600-94504000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr9:94483600-94519400	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr9:94486200-94521000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr9:94486800-94517400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr9:94487000-94502200	Weak transcription	Esophagus	oesophagus
8	chr9:94487000-94535400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
9	chr9:94489000-94508800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr9:94490400-94521000	Weak transcription	Right Atrium	heart
11	chr9:94491600-94501000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr9:94493200-94517400	Weak transcription	HUES6 Cell Line	embryonic stem cell
13	chr9:94495000-94501800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
14	chr9:94497200-94502400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr9:94497200-94502400	Weak transcription	Spleen	Spleen
16	chr9:94497200-94502600	Strong transcription	Fetal Stomach	stomach
17	chr9:94497400-94503000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr9:94497600-94503000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr9:94499400-94509400	Weak transcription	Fetal Intestine Large	intestine
20	chr9:94499600-94517200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr9:94499800-94502200	Weak transcription	Fetal Intestine Small	intestine
22	chr9:94499800-94502200	Weak transcription	Fetal Lung	lung
23	chr9:94499800-94502400	Weak transcription	Ovary	ovary
24	chr9:94499800-94503000	Weak transcription	Fetal Muscle Leg	muscle
25	chr9:94499800-94503000	Weak transcription	Stomach Smooth Muscle	stomach
26	chr9:94499800-94503200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
27	chr9:94499800-94503200	Weak transcription	Colon Smooth Muscle	Colon
28	chr9:94499800-94508800	Weak transcription	K562	blood
29	chr9:94499800-94517000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
30	chr9:94499800-94520400	Weak transcription	Duodenum Smooth Muscle	Duodenum
31	chr9:94499800-94522800	Weak transcription	Gastric	stomach
32	chr9:94499800-94523200	Weak transcription	Placenta Amnion	Placenta Amnion
33	chr9:94500400-94505600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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