The 2.0 version of rSNPBase

Variant report

Variant rs568570878
Chromosome Location chr4:107062699-107062700
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:107035600-107083200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr4:107037600-107066400 Weak transcription Fetal Kidney kidney
3 chr4:107037800-107077400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr4:107038000-107112000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr4:107053600-107067600 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr4:107053800-107064200 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr4:107053800-107070000 Weak transcription Brain Hippocampus Middle brain
8 chr4:107053800-107080000 Weak transcription Right Ventricle heart
9 chr4:107053800-107083400 Weak transcription HSMM muscle
10 chr4:107053800-107083800 Weak transcription Left Ventricle heart
11 chr4:107053800-107101600 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr4:107054000-107063400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr4:107054000-107066400 Weak transcription Liver Liver
14 chr4:107054000-107067000 Weak transcription Fetal Lung lung
15 chr4:107054000-107067000 Weak transcription Fetal Muscle Leg muscle
16 chr4:107054000-107067800 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr4:107054000-107070000 Weak transcription Primary hematopoietic stem cells blood
18 chr4:107054000-107070400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr4:107054000-107074400 Weak transcription HepG2 liver
20 chr4:107054000-107076800 Weak transcription Fetal Muscle Trunk muscle
21 chr4:107054000-107077000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr4:107054000-107077000 Weak transcription Fetal Intestine Large intestine
23 chr4:107054000-107077400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr4:107054000-107077400 Weak transcription Aorta Aorta
25 chr4:107054000-107077400 Weak transcription Fetal Stomach stomach
26 chr4:107054000-107077400 Weak transcription Lung lung
27 chr4:107054000-107081600 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr4:107054000-107083200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr4:107054000-107083400 Weak transcription Pancreas Pancrea
30 chr4:107054000-107091000 Weak transcription Stomach Smooth Muscle stomach
31 chr4:107054000-107113600 Weak transcription Brain Anterior Caudate brain
32 chr4:107054200-107065800 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr4:107054200-107070000 Weak transcription Adipose Nuclei Adipose
34 chr4:107054200-107083400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr4:107054600-107064600 Weak transcription Primary T cells fromperipheralblood blood
36 chr4:107054600-107074400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr4:107055600-107063600 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr4:107056000-107066600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr4:107056000-107067200 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr4:107056000-107067200 Weak transcription Primary T cells from cord blood blood
41 chr4:107056200-107067200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr4:107056200-107077000 Weak transcription Ovary ovary
43 chr4:107056200-107083400 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr4:107056800-107065000 Weak transcription Primary B cells from peripheral blood blood
45 chr4:107057800-107069800 Weak transcription Primary B cells from cord blood blood
46 chr4:107062200-107071200 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015