The 2.0 version of rSNPBase

Variant report

Variant rs56861054
Chromosome Location chr2:32459091-32459092
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:32404200-32460600 Weak transcription Esophagus oesophagus
2 chr2:32443000-32483600 Strong transcription Primary neutrophils fromperipheralblood blood
3 chr2:32443200-32483800 Strong transcription Monocytes-CD14+_RO01746 blood
4 chr2:32445800-32461400 Weak transcription Psoas Muscle Psoas
5 chr2:32447400-32483800 Strong transcription Primary monocytes fromperipheralblood blood
6 chr2:32448200-32460800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr2:32448200-32462400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr2:32448400-32474800 Weak transcription Colon Smooth Muscle Colon
9 chr2:32448600-32460800 Weak transcription Brain Inferior Temporal Lobe brain
10 chr2:32448800-32465400 Weak transcription Osteobl bone
11 chr2:32448800-32467000 Weak transcription Left Ventricle heart
12 chr2:32448800-32475600 Weak transcription Lung lung
13 chr2:32448800-32484800 Weak transcription Brain Cingulate Gyrus brain
14 chr2:32449000-32463200 Weak transcription HSMMtube muscle
15 chr2:32450600-32459400 Weak transcription NHEK skin
16 chr2:32451400-32462800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr2:32451400-32463200 Weak transcription Primary B cells from peripheral blood blood
18 chr2:32451400-32466400 Weak transcription Brain Hippocampus Middle brain
19 chr2:32451600-32459400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr2:32451600-32459600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr2:32451600-32459600 Weak transcription Aorta Aorta
22 chr2:32451600-32459600 Weak transcription HSMM muscle
23 chr2:32451600-32459800 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr2:32451600-32459800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr2:32451600-32460000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr2:32451600-32460600 Weak transcription Brain Anterior Caudate brain
27 chr2:32451600-32461200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr2:32451600-32461400 Weak transcription Fetal Intestine Large intestine
29 chr2:32451600-32461400 Weak transcription Fetal Stomach stomach
30 chr2:32451600-32462000 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr2:32451600-32463200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr2:32451600-32464000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
33 chr2:32451600-32464000 Weak transcription NH-A brain
34 chr2:32451600-32464800 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr2:32451600-32466200 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr2:32451600-32466400 Weak transcription Primary hematopoietic stem cells blood
37 chr2:32451600-32475600 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr2:32451800-32467600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr2:32452000-32475400 Weak transcription Spleen Spleen
40 chr2:32452200-32463200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr2:32452200-32466400 Weak transcription Liver Liver
42 chr2:32452200-32467400 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr2:32452200-32468200 Weak transcription Primary T cells from cord blood blood
44 chr2:32452200-32479400 Weak transcription Adipose Nuclei Adipose
45 chr2:32452600-32461600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr2:32452600-32467200 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr2:32453000-32459200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr2:32457400-32465000 Weak transcription A549 lung
49 chr2:32457600-32459400 Weak transcription HMEC breast
50 chr2:32458200-32462200 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015