Variant report

Variant	rs568681095
Chromosome Location	chr4:166011053-166011054
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:166008810..166011207-chr4:166017239..166019604,2	K562	blood:

Extended variants
information (count: 10 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026152	chr4:165622244-166027447	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
2	nsv537336	chr4:165622244-166027447	Enhancers Weak transcription Strong transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
3	nsv1022210	chr4:165792630-166251612	Genic enhancers Enhancers Active TSS Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
4	nsv537337	chr4:165792630-166251612	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
5	nsv1021905	chr4:165852926-166212878	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
6	nsv533191	chr4:165879671-166171638	Active TSS Strong transcription Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
7	esv1835468	chr4:165969625-166023258	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	n/a
8	esv1840053	chr4:165969625-166023258	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	n/a
9	nsv881168	chr4:165975122-166196438	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
10	nsv518959	chr4:166010815-166014766	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:165990800-166026600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr4:165994600-166032800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr4:165995400-166019600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr4:165996000-166019800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr4:165996000-166033000	Weak transcription	Thymus	Thymus
6	chr4:165996800-166032600	Weak transcription	Hela-S3	cervix
7	chr4:165997400-166018600	Strong transcription	Monocytes-CD14+_RO01746	blood
8	chr4:165997800-166032400	Weak transcription	Fetal Brain Male	brain
9	chr4:165999000-166022800	Weak transcription	HUVEC	blood vessel
10	chr4:165999000-166023000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
11	chr4:165999200-166020600	Weak transcription	Placenta Amnion	Placenta Amnion
12	chr4:165999400-166033200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr4:165999600-166033000	Weak transcription	Osteobl	bone
14	chr4:166000600-166032800	Weak transcription	NHDF-Ad	bronchial
15	chr4:166001200-166020600	Weak transcription	Fetal Heart	heart
16	chr4:166005000-166012000	Strong transcription	Fetal Intestine Large	intestine
17	chr4:166005000-166015200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
18	chr4:166005000-166023400	Strong transcription	Fetal Stomach	stomach
19	chr4:166005000-166023600	Strong transcription	Ovary	ovary
20	chr4:166005200-166012000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
21	chr4:166005200-166012000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
22	chr4:166005200-166017000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
23	chr4:166005200-166017600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr4:166005200-166018600	Strong transcription	Primary B cells from peripheral blood	blood
25	chr4:166005200-166023200	Strong transcription	Fetal Intestine Small	intestine
26	chr4:166005200-166024200	Strong transcription	Liver	Liver
27	chr4:166005400-166016800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr4:166005600-166012800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr4:166005800-166011800	Strong transcription	Brain Hippocampus Middle	brain
30	chr4:166005800-166026000	Weak transcription	Psoas Muscle	Psoas
31	chr4:166005800-166033000	Weak transcription	NH-A	brain
32	chr4:166006000-166016200	Weak transcription	HSMM	muscle
33	chr4:166006600-166011200	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
34	chr4:166006600-166012200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
35	chr4:166006600-166012600	Strong transcription	Skeletal Muscle Male	skeletal muscle
36	chr4:166006600-166012800	Strong transcription	Primary T cells from cord blood	blood
37	chr4:166006800-166011800	Strong transcription	Fetal Muscle Trunk	muscle
38	chr4:166007200-166033000	Weak transcription	A549	lung
39	chr4:166007400-166032600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
40	chr4:166007600-166023000	Weak transcription	K562	blood
41	chr4:166007600-166033000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
42	chr4:166007600-166033000	Weak transcription	HSMMtube	muscle
43	chr4:166007800-166020600	Weak transcription	HUES48 Cell Line	embryonic stem cell
44	chr4:166007800-166020600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr4:166008000-166032600	Weak transcription	Pancreatic Islets	Pancreatic Islet
46	chr4:166008600-166032600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
47	chr4:166008600-166032600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
48	chr4:166008600-166033000	Weak transcription	Colonic Mucosa	Colon
49	chr4:166008600-166033200	Weak transcription	Gastric	stomach
50	chr4:166008800-166020400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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