Variant report

Variant	rs568746617
Chromosome Location	chr12:63168076-63168077
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv899160	chr12:63149213-63209623	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
2	nsv983337	chr12:63167541-63169131	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:63140000-63168600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
2	chr12:63145800-63169400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr12:63150000-63179800	Weak transcription	Primary hematopoietic stem cells	blood
4	chr12:63153600-63171000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr12:63161200-63168200	Weak transcription	Fetal Muscle Trunk	muscle
6	chr12:63161400-63180000	Weak transcription	Aorta	Aorta
7	chr12:63161800-63179400	Weak transcription	Brain Angular Gyrus	brain
8	chr12:63162000-63170400	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr12:63162200-63174800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr12:63163200-63168200	Weak transcription	HepG2	liver
11	chr12:63163600-63178400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr12:63163800-63175000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr12:63164600-63175200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr12:63164800-63170400	Weak transcription	Gastric	stomach
15	chr12:63164800-63177200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
16	chr12:63164800-63177600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr12:63164800-63177800	Weak transcription	H9 Cell Line	embryonic stem cell
18	chr12:63165600-63182000	Weak transcription	Brain Cingulate Gyrus	brain
19	chr12:63166000-63177200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
20	chr12:63166400-63170400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr12:63166400-63171000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr12:63166600-63175400	Weak transcription	A549	lung
23	chr12:63166600-63177800	Weak transcription	HUES6 Cell Line	embryonic stem cell
24	chr12:63166600-63179600	Weak transcription	NHLF	lung
25	chr12:63166800-63168400	Enhancers	Left Ventricle	heart
26	chr12:63167000-63177800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
27	chr12:63167400-63168200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr12:63167400-63168200	Enhancers	Fetal Intestine Small	intestine
29	chr12:63167600-63168400	Enhancers	Monocytes-CD14+_RO01746	blood
30	chr12:63167600-63171000	Weak transcription	Pancreas	Pancrea
31	chr12:63167800-63174800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
32	chr12:63167800-63177200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
33	chr12:63168000-63169200	Enhancers	Primary monocytes fromperipheralblood	blood
34	chr12:63168000-63169200	Enhancers	Fetal Muscle Leg	muscle
35	chr12:63168000-63170200	Weak transcription	Fetal Intestine Large	intestine

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