Variant report

Variant	rs568756834
Chromosome Location	chr5:57778191-57778192
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:16 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3405804	chr5:57774995-57779993	Bivalent Enhancer Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
2	esv11510	chr5:57776769-57778784	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
3	nsv820995	chr5:57776769-57778897	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
4	nsv513241	chr5:57776969-57779389	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases
5	esv3423189	chr5:57777045-57779543	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
6	esv2422993	chr5:57777076-57778801	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
7	esv2083262	chr5:57777375-57778314	Weak transcription ZNF genes & repeats Enhancers	n/a	n/a	inside rSNPs	diseases
8	esv3389285	chr5:57777405-57778258	Weak transcription ZNF genes & repeats Enhancers	n/a	n/a	inside rSNPs	diseases
9	esv3519929	chr5:57777424-57778323	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
10	esv3519928	chr5:57777445-57778193	ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
11	esv3390301	chr5:57777446-57778271	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
12	esv3519927	chr5:57777477-57778211	Weak transcription ZNF genes & repeats Enhancers	n/a	n/a	inside rSNPs	diseases
13	esv3519931	chr5:57777477-57778211	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
14	esv15185	chr5:57777544-57778200	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
15	nsv598246	chr5:57777623-57785273	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
16	esv3383570	chr5:57778025-57778236	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57773200-57785400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr5:57774200-57779000	Weak transcription	Primary B cells from cord blood	blood
3	chr5:57774200-57779400	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr5:57774200-57780000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr5:57774400-57779000	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr5:57776800-57778400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr5:57777000-57778200	Weak transcription	Primary B cells from peripheral blood	blood
8	chr5:57777200-57778600	Enhancers	Spleen	Spleen
9	chr5:57777400-57778200	Weak transcription	Gastric	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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