Variant report

Variant	rs568777737
Chromosome Location	chr21:44848340-44848341
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	STAT3	chr21:44847996-44848372	MCF10A-Er-Src	breast:	n/a	chr21:44848107-44848115
2	TCF7L2	chr21:44847923-44848515	Hela-S3	cervix:	n/a	chr21:44848269-44848276
3	STAT3	chr21:44847904-44848353	MCF10A-Er-Src	breast:	n/a	chr21:44848107-44848115
4	SMC3	chr21:44846904-44848434	Hela-S3	cervix:	n/a	n/a
5	POLR2A	chr21:44845613-44848741	HUVEC	blood vessel:	n/a	n/a
6	RFX5	chr21:44847844-44848378	Hela-S3	cervix:	n/a	n/a
7	TAF1	chr21:44847877-44848442	A549	lung:	n/a	n/a
8	POLR2A	chr21:44843825-44848789	MCF10A-Er-Src	breast:	n/a	n/a
9	POLR2A	chr21:44843337-44848672	Hela-S3	cervix:	n/a	n/a
10	CTCF	chr21:44846901-44848586	A549	lung:	n/a	n/a
11	CTCF	chr21:44846881-44848356	SK-N-SH	brain:	n/a	n/a
12	CEBPB	chr21:44847929-44848524	A549	lung:	n/a	chr21:44848189-44848200
13	MYC	chr21:44846799-44848348	MCF10A-Er-Src	breast:	n/a	chr21:44847245-44847254
14	FOXA2	chr21:44848044-44848350	A549	lung:	n/a	n/a
15	FOS	chr21:44848031-44848346	MCF10A-Er-Src	breast:	n/a	chr21:44848282-44848291
16	GATA3	chr21:44847956-44848511	A549	lung:	n/a	n/a
17	TBP	chr21:44847871-44848443	Hela-S3	cervix:	n/a	n/a
18	NR3C1	chr21:44847966-44848377	A549	lung:	n/a	n/a
19	BCL3	chr21:44847949-44848442	A549	lung:	n/a	n/a
20	SP1	chr21:44847858-44848479	A549	lung:	n/a	n/a
21	MAX	chr21:44847647-44848417	A549	lung:	n/a	n/a
22	CEBPB	chr21:44847947-44848341	MCF-7	breast:	n/a	chr21:44848189-44848200
23	CHD2	chr21:44846908-44848353	Hela-S3	cervix:	n/a	n/a
24	EP300	chr21:44847997-44848483	A549	lung:	n/a	n/a
25	STAT3	chr21:44847965-44848347	MCF10A-Er-Src	breast:	n/a	chr21:44848107-44848115
26	STAT3	chr21:44847950-44848392	MCF10A-Er-Src	breast:	n/a	chr21:44848107-44848115
27	GATA3	chr21:44847819-44848599	A549	lung:	n/a	n/a
28	POLR2A	chr21:44831096-44848845	Hela-S3	cervix:	n/a	n/a
29	MAZ	chr21:44845563-44848404	IMR90	lung:	n/a	chr21:44847245-44847254
30	SMC3	chr21:44848279-44848341	HepG2	liver:	n/a	n/a
31	POLR2A	chr21:44843910-44848744	IMR90	lung:	n/a	n/a
32	TFAP2C	chr21:44847115-44848481	Hela-S3	cervix:	n/a	chr21:44847567-44847582
33	TFAP2A	chr21:44846887-44848417	Hela-S3	cervix:	n/a	chr21:44847407-44847418 chr21:44847568-44847579 chr21:44848168-44848182 chr21:44848166-44848181 chr21:44847808-44847816 chr21:44847805-44847817 chr21:44848168-44848182 chr21:44847602-44847613 chr21:44848168-44848182 chr21:44847966-44847978 chr21:44847808-44847816 chr21:44848171-44848179 chr21:44847568-44847579 chr21:44847168-44847183 chr21:44847602-44847613 chr21:44847568-44847579 chr21:44847808-44847816 chr21:44847568-44847579 chr21:44847602-44847613 chr21:44847602-44847613 chr21:44847807-44847822 chr21:44847567-44847581
34	CEBPB	chr21:44848016-44848379	IMR90	lung:	n/a	chr21:44848189-44848200
35	POLR2A	chr21:44847211-44848459	Hela-S3	cervix:	n/a	n/a
36	TCF12	chr21:44847732-44848557	A549	lung:	n/a	n/a
37	SP1	chr21:44847769-44848527	A549	lung:	n/a	n/a
38	EP300	chr21:44847895-44848604	A549	lung:	n/a	n/a
39	MAX	chr21:44845610-44848504	A549	lung:	n/a	chr21:44847245-44847254
40	BCL3	chr21:44847923-44848483	A549	lung:	n/a	n/a
41	MAX	chr21:44846833-44848633	Hela-S3	cervix:	n/a	chr21:44847245-44847254
42	CEBPB	chr21:44847914-44848394	Hela-S3	cervix:	n/a	chr21:44848189-44848200
43	POLR2A	chr21:44843895-44849330	Hela-S3	cervix:	n/a	n/a
44	MYC	chr21:44848007-44848471	MCF10A-Er-Src	breast:	n/a	n/a
45	CEBPB	chr21:44848002-44848378	A549	lung:	n/a	chr21:44848189-44848200
46	REST	chr21:44847765-44848436	A549	lung:	n/a	n/a
47	ELF1	chr21:44848040-44848355	A549	lung:	n/a	n/a
48	FOS	chr21:44848039-44848351	MCF10A-Er-Src	breast:	n/a	chr21:44848282-44848291
49	CHD1	chr21:44843691-44848838	IMR90	lung:	n/a	n/a
50	GABPA	chr21:44848001-44848372	A549	lung:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr21:44845531..44848527-chr21:45078395..45081083,3	K562	blood:
2	chr21:44847194..44850306-chr21:45028262..45031203,4	MCF-7	breast:
3	chr21:44781136..44783679-chr21:44846485..44848438,3	MCF-7	breast:
4	chr21:44843469..44848793-chr21:44863960..44868998,7	MCF-7	breast:
5	chr21:44814074..44816129-chr21:44848271..44850690,2	K562	blood:
6	chr21:44748879..44756198-chr21:44843023..44848924,8	MCF-7	breast:
7	chr21:44847451..44851718-chr21:44905935..44909722,5	MCF-7	breast:
8	chr21:44393394..44395393-chr21:44845863..44848576,2	MCF-7	breast:
9	chr21:44586813..44589241-chr21:44845396..44848609,3	MCF-7	breast:
10	chr16:3108783..3109454-chr21:44847676..44848561,2	Hela-S3	cervix:

Variant related genes	Relation type
SIK1	TF binding region
ENSG00000237989	Chromatin interaction
ENSG00000237864	Chromatin interaction
ENSG00000160208	Chromatin interaction
ENSG00000188660	Chromatin interaction
ENSG00000160199	Chromatin interaction
ENSG00000160207	Chromatin interaction
ENSG00000160202	Chromatin interaction
ENSG00000225637	Chromatin interaction
ENSG00000261971	Chromatin interaction

Extended variants
information (count: 53 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:53 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1056684	chr21:44539714-44886119	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	109 gene(s)	inside rSNPs	diseases
2	nsv913831	chr21:44563995-44931821	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	118 gene(s)	inside rSNPs	diseases
3	nsv1057726	chr21:44711850-44957303	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	117 gene(s)	inside rSNPs	diseases
4	nsv544466	chr21:44711850-44957303	Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	117 gene(s)	inside rSNPs	diseases
5	nsv913837	chr21:44731138-44853859	Enhancers Weak transcription Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
6	nsv913838	chr21:44740134-44931821	Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	111 gene(s)	inside rSNPs	diseases
7	nsv913839	chr21:44750200-44931821	Strong transcription Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	111 gene(s)	inside rSNPs	diseases
8	nsv913841	chr21:44761874-44853859	Bivalent/Poised TSS Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Enhancers Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
9	nsv913844	chr21:44779680-44875495	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
10	nsv913845	chr21:44781356-44874702	Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
11	nsv470901	chr21:44781356-44884252	Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
12	nsv913847	chr21:44792003-44931821	Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
13	nsv913849	chr21:44817248-44925334	Genic enhancers Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	97 gene(s)	inside rSNPs	diseases
14	nsv459283	chr21:44823479-44853859	Flanking Bivalent TSS/Enh Enhancers Strong transcription ZNF genes & repeats Weak transcription Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA target site	49 gene(s)	inside rSNPs	diseases
15	nsv587673	chr21:44823479-44853859	Strong transcription Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA target site	49 gene(s)	inside rSNPs	diseases
16	nsv587674	chr21:44823479-44858534	Bivalent Enhancer Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA target site	51 gene(s)	inside rSNPs	diseases
17	nsv516339	chr21:44823479-44873060	Flanking Active TSS Strong transcription Enhancers Active TSS Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	68 gene(s)	inside rSNPs	diseases
18	nsv587680	chr21:44827526-44858534	Flanking Active TSS Enhancers Strong transcription Genic enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA target site	51 gene(s)	inside rSNPs	diseases
19	nsv459284	chr21:44827526-44866913	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
20	nsv587681	chr21:44827526-44866913	Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
21	nsv459286	chr21:44829058-44866913	Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
22	nsv459287	chr21:44829058-44866913	Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
23	nsv587682	chr21:44829058-44866913	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
24	nsv913852	chr21:44829087-44925334	Enhancers Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	95 gene(s)	inside rSNPs	diseases
25	nsv913853	chr21:44831981-44873017	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	68 gene(s)	inside rSNPs	diseases
26	nsv913854	chr21:44831981-44873060	Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	68 gene(s)	inside rSNPs	diseases
27	nsv913855	chr21:44831981-44873795	Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
28	nsv913856	chr21:44831981-44874702	Enhancers ZNF genes & repeats Weak transcription Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
29	nsv913857	chr21:44831981-44875495	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
30	nsv913858	chr21:44831981-44877881	Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
31	nsv913859	chr21:44831981-44884252	Flanking Active TSS Weak transcription Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	78 gene(s)	inside rSNPs	diseases
32	nsv913860	chr21:44831981-44925334	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	95 gene(s)	inside rSNPs	diseases
33	nsv913862	chr21:44833854-44877881	Weak transcription Strong transcription Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
34	nsv913863	chr21:44834825-44858534	Genic enhancers Weak transcription Enhancers Active TSS Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA target site	47 gene(s)	inside rSNPs	diseases
35	nsv913864	chr21:44834825-44860542	Transcr. at gene 5' and 3' Enhancers Strong transcription Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
36	nsv459288	chr21:44835508-44870150	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	62 gene(s)	inside rSNPs	diseases
37	nsv587685	chr21:44835508-44870150	Weak transcription Enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	62 gene(s)	inside rSNPs	diseases
38	nsv913865	chr21:44835508-44873017	Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
39	nsv913866	chr21:44835508-44874702	Strong transcription Weak transcription Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
40	nsv913867	chr21:44835508-44925334	Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	91 gene(s)	inside rSNPs	diseases
41	nsv913868	chr21:44835508-44954522	Weak transcription Enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	98 gene(s)	inside rSNPs	diseases
42	nsv913869	chr21:44837555-44871063	Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	61 gene(s)	inside rSNPs	diseases
43	nsv828899	chr21:44838055-44864931	Weak transcription Enhancers Bivalent Enhancer Genic enhancers Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	50 gene(s)	inside rSNPs	diseases
44	nsv828900	chr21:44838108-44852908	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS Genic enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	43 gene(s)	inside rSNPs	diseases
45	nsv828901	chr21:44838108-44873453	Weak transcription Bivalent/Poised TSS Enhancers Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	63 gene(s)	inside rSNPs	diseases
46	nsv828902	chr21:44839016-44860932	Bivalent/Poised TSS Flanking Active TSS Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
47	nsv828903	chr21:44839803-44864931	Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	46 gene(s)	inside rSNPs	diseases
48	nsv828904	chr21:44841802-44850191	Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	34 gene(s)	inside rSNPs	diseases
49	esv3382647	chr21:44845124-44848822	Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	30 gene(s)	inside rSNPs	diseases
50	esv3436434	chr21:44845774-44848472	Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	30 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:82 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:44846400-44848400	Active TSS	Duodenum Smooth Muscle	Duodenum
2	chr21:44847400-44848400	Flanking Active TSS	Stomach Smooth Muscle	stomach
3	chr21:44847400-44852000	Enhancers	Placenta	Placenta
4	chr21:44847600-44848400	Flanking Bivalent TSS/Enh	Monocytes-CD14+_RO01746	blood
5	chr21:44847600-44849200	Enhancers	Spleen	Spleen
6	chr21:44847600-44850600	Enhancers	HepG2	liver
7	chr21:44847600-44851200	Weak transcription	Gastric	stomach
8	chr21:44847800-44848400	Enhancers	Primary T helper naive cells from peripheral blood	blood
9	chr21:44847800-44848400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
10	chr21:44847800-44848600	Flanking Active TSS	A549	lung
11	chr21:44847800-44849400	Enhancers	Fetal Heart	heart
12	chr21:44847800-44849400	Flanking Active TSS	Hela-S3	cervix
13	chr21:44848000-44848400	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr21:44848000-44848400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr21:44848000-44848400	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr21:44848000-44848400	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
17	chr21:44848000-44848400	Enhancers	Primary T killer memory cells from peripheral blood	blood
18	chr21:44848000-44848400	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr21:44848000-44848400	Flanking Active TSS	Colon Smooth Muscle	Colon
20	chr21:44848000-44848400	Weak transcription	Ovary	ovary
21	chr21:44848000-44848400	Weak transcription	Psoas Muscle	Psoas
22	chr21:44848000-44848400	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
23	chr21:44848000-44848600	Enhancers	Primary B cells from cord blood	blood
24	chr21:44848000-44848600	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
25	chr21:44848000-44848600	Weak transcription	Esophagus	oesophagus
26	chr21:44848000-44848600	Bivalent Enhancer	Fetal Brain Male	brain
27	chr21:44848000-44848600	Flanking Active TSS	Fetal Lung	lung
28	chr21:44848000-44848600	Bivalent Enhancer	Fetal Thymus	thymus
29	chr21:44848000-44848600	Enhancers	HMEC	breast
30	chr21:44848000-44848800	Enhancers	Primary B cells from peripheral blood	blood
31	chr21:44848000-44849200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
32	chr21:44848000-44849200	Enhancers	Lung	lung
33	chr21:44848000-44849200	Enhancers	Stomach Mucosa	stomach
34	chr21:44848000-44849400	Enhancers	Pancreas	Pancrea
35	chr21:44848000-44849600	Bivalent Enhancer	Fetal Muscle Leg	muscle
36	chr21:44848000-44849600	Weak transcription	Dnd41	blood
37	chr21:44848000-44850200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
38	chr21:44848000-44850600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
39	chr21:44848000-44850600	Enhancers	Placenta Amnion	Placenta Amnion
40	chr21:44848000-44850600	Weak transcription	Right Ventricle	heart
41	chr21:44848000-44850600	Weak transcription	Sigmoid Colon	Sigmoid Colon
42	chr21:44848000-44850800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr21:44848000-44851800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
44	chr21:44848000-44852000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr21:44848000-44861400	Weak transcription	Colonic Mucosa	Colon
46	chr21:44848200-44848400	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
47	chr21:44848200-44848400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
48	chr21:44848200-44848400	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
49	chr21:44848200-44848400	Bivalent Enhancer	Primary neutrophils fromperipheralblood	blood
50	chr21:44848200-44848400	Enhancers	Primary T helper cells PMA-I stimulated	--

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