Variant report

Variant	rs568884653
Chromosome Location	chr3:159463514-159463515
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3508211	chr3:159460683-159464431	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv3463577	chr3:159461238-159463577	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3508213	chr3:159461273-159463556	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv3508209	chr3:159461278-159463532	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3463578	chr3:159461291-159463543	Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv818181	chr3:159461456-159466206	Enhancers Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv963569	chr3:159462963-159467316	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:159450800-159480600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr3:159451800-159470200	Weak transcription	NHEK	skin
3	chr3:159451800-159473200	Weak transcription	Aorta	Aorta
4	chr3:159451800-159478800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr3:159452000-159466200	Weak transcription	HMEC	breast
6	chr3:159452400-159468200	Weak transcription	HSMM	muscle
7	chr3:159455800-159466200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr3:159457200-159466000	Weak transcription	Liver	Liver
9	chr3:159458200-159466200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr3:159458200-159472400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr3:159458400-159466200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr3:159460400-159464800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
13	chr3:159461600-159465800	Weak transcription	A549	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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