Variant report

Variant	rs569073176
Chromosome Location	chr10:94450227-94450228
allele	-/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAX	chr10:94449473-94450369	HepG2	liver:	n/a	chr10:94450120-94450130
2	E2F6	chr10:94448605-94450527	K562	blood:	n/a	chr10:94449521-94449530 chr10:94449521-94449533 chr10:94449605-94449615
3	YY1	chr10:94449447-94450331	ECC-1	luminal epithelium:	n/a	chr10:94449622-94449636 chr10:94449644-94449658 chr10:94449640-94449649 chr10:94449521-94449530
4	POLR2A	chr10:94449260-94452278	HL-60	blood:	n/a	n/a
5	POLR2A	chr10:94449619-94458127	K562	blood:	n/a	n/a
6	MXI1	chr10:94449663-94450477	Hela-S3	cervix:	n/a	n/a
7	TCF7L2	chr10:94449521-94450348	HCT-116	colon:	n/a	n/a
8	FOSL2	chr10:94449972-94450543	SK-N-SH	brain:	n/a	chr10:94450279-94450287
9	POLR2A	chr10:94449415-94450307	GM12892	blood:	n/a	n/a
10	POLR2A	chr10:94449117-94450501	A549	lung:	n/a	n/a
11	MAX	chr10:94448657-94452062	NB4	blood:	n/a	chr10:94451525-94451534 chr10:94448823-94448830 chr10:94451440-94451449 chr10:94450120-94450130
12	TBP	chr10:94450226-94450680	K562	blood:	n/a	n/a
13	E2F6	chr10:94450067-94450679	A549	lung:	n/a	n/a
14	RCOR1	chr10:94448029-94451319	IMR90	lung:	n/a	n/a
15	TAF1	chr10:94449025-94450525	HepG2	liver:	n/a	n/a
16	RUNX3	chr10:94449585-94450880	GM12878	blood:	n/a	n/a
17	POLR2A	chr10:94449267-94451017	HUVEC	blood vessel:	n/a	n/a
18	POLR2A	chr10:94449181-94450952	Hela-S3	cervix:	n/a	n/a
19	RAD21	chr10:94450194-94450394	Hela-S3	cervix:	n/a	n/a
20	GATA2	chr10:94450060-94451722	HUVEC	blood vessel:	n/a	chr10:94450729-94450739
21	HEY1	chr10:94449182-94452787	HepG2	liver:	n/a	chr10:94449456-94449471 chr10:94449722-94449737 chr10:94449663-94449678
22	POLR2A	chr10:94449226-94451039	PBDE	blood:	n/a	n/a
23	POLR2A	chr10:94449531-94451280	K562	blood:	n/a	n/a
24	RFX5	chr10:94450173-94450664	Hela-S3	cervix:	n/a	n/a
25	POLR2A	chr10:94449569-94451197	K562	blood:	n/a	n/a
26	TCF12	chr10:94449566-94451184	A549	lung:	n/a	chr10:94450955-94450965
27	TAF1	chr10:94449218-94450402	A549	lung:	n/a	n/a
28	POLR2A	chr10:94448699-94450346	HepG2	liver:	n/a	n/a
29	POLR2A	chr10:94449284-94451166	HUVEC	blood vessel:	n/a	n/a
30	MAX	chr10:94448488-94450958	A549	lung:	n/a	chr10:94448823-94448830 chr10:94450120-94450130
31	MAX	chr10:94450077-94450429	SK-N-SH	brain:	n/a	chr10:94450120-94450130
32	POLR2A	chr10:94449563-94450391	A549	lung:	n/a	n/a
33	MAX	chr10:94448461-94450466	K562	blood:	n/a	chr10:94448823-94448830 chr10:94450120-94450130
34	CHD2	chr10:94449248-94450546	Hela-S3	cervix:	n/a	chr10:94449522-94449532 chr10:94449385-94449395
35	MAX	chr10:94449654-94450442	H1-hESC	embryonic stem cell:	n/a	chr10:94450120-94450130
36	MYC	chr10:94448295-94450402	K562	blood:	n/a	chr10:94448823-94448830 chr10:94450120-94450130
37	POLR2A	chr10:94449238-94452174	NB4	blood:	n/a	n/a
38	JUND	chr10:94450180-94450882	K562	blood:	n/a	chr10:94450279-94450287
39	MAX	chr10:94450193-94450769	GM12878	blood:	n/a	n/a
40	BHLHE40	chr10:94450084-94450434	GM12878	blood:	n/a	chr10:94450146-94450162
41	TEAD4	chr10:94449526-94450285	K562	blood:	n/a	n/a
42	PAX5	chr10:94450102-94450468	GM12892	blood:	n/a	chr10:94450319-94450328
43	JUND	chr10:94449457-94450579	A549	lung:	n/a	chr10:94450279-94450287
44	MAX	chr10:94448414-94451178	A549	lung:	n/a	chr10:94448823-94448830 chr10:94450120-94450130
45	MAZ	chr10:94449282-94450727	K562	blood:	n/a	chr10:94450120-94450130
46	MAX	chr10:94448297-94450604	HepG2	liver:	n/a	chr10:94448823-94448830 chr10:94450120-94450130
47	MYC	chr10:94449246-94450989	K562	blood:	n/a	chr10:94450120-94450130
48	POLR2A	chr10:94449309-94450474	GM15510	blood:	n/a	n/a
49	CEBPB	chr10:94450133-94450542	Hela-S3	cervix:	n/a	n/a
50	FOS	chr10:94450080-94450959	HUVEC	blood vessel:	n/a	chr10:94450279-94450287

No.	Distal block	Cell Line	Cell type
1	chr10:94349533..94356622-chr10:94447410..94453498,11	K562	blood:
2	chr10:94349533..94354628-chr10:94448059..94453493,12	K562	blood:
3	chr10:94449758..94450309-chr20:30192485..30193219,2	Hela-S3	cervix:
4	chr10:94449913..94450519-chr18:12990641..12991585,2	Hela-S3	cervix:
5	chr10:94449237..94450232-chr6:27805942..27806496,2	NB4	blood:
6	chr10:94449603..94452740-chr10:94589464..94592452,3	K562	blood:
7	chr10:94450024..94450724-chr19:12901932..12902636,2	Hela-S3	cervix:
8	chr10:94333616..94336720-chr10:94448718..94451044,3	K562	blood:
9	chr10:94449678..94450357-chr11:62359130..62359860,2	Hela-S3	cervix:
10	chr10:94448193..94452899-chr10:94604769..94609293,6	K562	blood:
11	chr10:94449635..94450319-chr15:59396946..59397778,2	NB4	blood:

Variant related genes	Relation type
HHEX	TF binding region
ENSG00000184348	Chromatin interaction
ENSG00000149016	Chromatin interaction
ENSG00000266969	Chromatin interaction
ENSG00000233822	Chromatin interaction
ENSG00000171223	Chromatin interaction
ENSG00000138190	Chromatin interaction
ENSG00000125968	Chromatin interaction
ENSG00000157456	Chromatin interaction
ENSG00000101639	Chromatin interaction
ENSG00000119912	Chromatin interaction
ENSG00000138160	Chromatin interaction

Extended variants
information (count: 51 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:51 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1046258	chr10:93866969-94466106	Active TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	58 gene(s)	inside rSNPs	diseases
2	nsv895894	chr10:94249982-94452430	Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
3	esv3446249	chr10:94374508-94549394	Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Weak transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
4	esv1799475	chr10:94392728-94450386	Strong transcription Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
5	esv1801116	chr10:94392728-94450386	Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
6	esv1839570	chr10:94392728-94450386	Weak transcription Flanking Bivalent TSS/Enh Active TSS Strong transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
7	esv1837497	chr10:94392728-94452430	Flanking Bivalent TSS/Enh Active TSS Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
8	esv1794949	chr10:94392728-94465559	Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
9	nsv825517	chr10:94397149-94472509	Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Enhancers ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
10	nsv825518	chr10:94403446-94467700	Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
11	esv1798525	chr10:94404824-94450386	Bivalent/Poised TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
12	esv1799618	chr10:94404824-94450386	Weak transcription Active TSS Bivalent Enhancer Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
13	esv1801775	chr10:94404824-94450386	Bivalent/Poised TSS Strong transcription Active TSS Weak transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
14	esv1837596	chr10:94404824-94450386	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Weak transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
15	esv1840926	chr10:94404824-94450386	Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
16	esv1842618	chr10:94404824-94450386	Active TSS Weak transcription Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
17	esv1802456	chr10:94404824-94452430	Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Weak transcription Enhancers Strong transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
18	esv1846797	chr10:94414263-94450386	Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
19	esv1851354	chr10:94414263-94450386	Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
20	esv1851372	chr10:94414263-94450386	Weak transcription Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
21	nsv895896	chr10:94429526-94460650	Weak transcription Bivalent/Poised TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
22	nsv895897	chr10:94430068-94460650	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
23	esv1816823	chr10:94446041-94452430	Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers Weak transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
24	esv3315862	chr10:94448397-94451545	Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
25	esv3315974	chr10:94448397-94451545	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
26	esv3493294	chr10:94448772-94450870	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Enhancers	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
27	esv3493295	chr10:94448772-94450870	Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Active TSS Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
28	nsv551926	chr10:94449160-94450438	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
29	esv16663	chr10:94449208-94450485	Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
30	esv1802897	chr10:94449235-94450334	Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
31	esv1813091	chr10:94449235-94450386	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
32	esv1849282	chr10:94449235-94450386	Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
33	nsv551928	chr10:94449235-94450438	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
34	esv1809105	chr10:94449235-94452430	Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
35	esv1814996	chr10:94449235-94452430	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
36	esv1820053	chr10:94449235-94452430	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
37	esv1829131	chr10:94449235-94452430	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Enhancers ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
38	esv1833890	chr10:94449235-94452430	Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Enhancers Weak transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
39	esv1837511	chr10:94449235-94452430	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
40	esv1839370	chr10:94449235-94452430	Flanking Active TSS Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Enhancers Genic enhancers	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
41	esv1795887	chr10:94449271-94450334	Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
42	nsv551930	chr10:94449286-94450438	Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
43	nsv551932	chr10:94449340-94450229	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
44	nsv551933	chr10:94449340-94450334	Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
45	esv1835659	chr10:94449340-94450386	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
46	nsv551934	chr10:94449340-94450386	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
47	nsv551935	chr10:94449340-94450438	Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
48	nsv551936	chr10:94449391-94450438	Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
49	nsv551937	chr10:94449494-94450438	Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a
50	nsv551938	chr10:94449617-94450438	Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:116 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94447800-94450600	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
2	chr10:94448400-94450600	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
3	chr10:94448400-94450600	Active TSS	Osteobl	bone
4	chr10:94448400-94451600	Active TSS	NHLF	lung
5	chr10:94448400-94451800	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
6	chr10:94448400-94452600	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
7	chr10:94448400-94452600	Bivalent/Poised TSS	Duodenum Smooth Muscle	Duodenum
8	chr10:94448400-94452800	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
9	chr10:94448600-94450400	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
10	chr10:94448600-94450400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr10:94448600-94450400	Active TSS	Breast Myoepithelial Primary Cells	Breast
12	chr10:94448600-94450600	Flanking Bivalent TSS/Enh	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr10:94448600-94450600	Active TSS	Aorta	Aorta
14	chr10:94448600-94450600	Bivalent/Poised TSS	Brain Angular Gyrus	brain
15	chr10:94448600-94450600	Bivalent/Poised TSS	NHEK	skin
16	chr10:94448600-94450800	Bivalent/Poised TSS	Brain Dorsolateral Prefrontal Cortex	brain
17	chr10:94448600-94451800	Active TSS	K562	blood
18	chr10:94448600-94451800	Active TSS	Monocytes-CD14+_RO01746	blood
19	chr10:94448600-94452400	Bivalent/Poised TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr10:94448600-94452400	Bivalent/Poised TSS	Brain Anterior Caudate	brain
21	chr10:94448600-94452400	Active TSS	Colon Smooth Muscle	Colon
22	chr10:94448600-94452400	Bivalent/Poised TSS	Psoas Muscle	Psoas
23	chr10:94448800-94450400	Active TSS	Pancreatic Islets	Pancreatic Islet
24	chr10:94448800-94450400	Flanking Active TSS	Right Ventricle	heart
25	chr10:94448800-94450600	Active TSS	Gastric	stomach
26	chr10:94448800-94450600	Active TSS	Rectal Smooth Muscle	rectum
27	chr10:94448800-94450600	Bivalent/Poised TSS	HSMM	muscle
28	chr10:94448800-94450800	Bivalent/Poised TSS	Rectal Mucosa Donor 31	rectum
29	chr10:94448800-94451000	Bivalent/Poised TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr10:94448800-94451600	Active TSS	A549	lung
31	chr10:94448800-94451800	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
32	chr10:94448800-94451800	Bivalent/Poised TSS	iPS DF 6.9 Cell Line	embryonic stem cell
33	chr10:94448800-94451800	Active TSS	Primary monocytes fromperipheralblood	blood
34	chr10:94448800-94452400	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
35	chr10:94448800-94452600	Bivalent/Poised TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
36	chr10:94449000-94450400	Active TSS	Primary T cells from cord blood	blood
37	chr10:94449000-94450400	Bivalent/Poised TSS	Fetal Adrenal Gland	Adrenal Gland
38	chr10:94449000-94450600	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
39	chr10:94449000-94450600	Active TSS	Esophagus	oesophagus
40	chr10:94449000-94450600	Active TSS	Small Intestine	intestine
41	chr10:94449000-94450600	Active TSS	Hela-S3	cervix
42	chr10:94449000-94450800	Active TSS	Sigmoid Colon	Sigmoid Colon
43	chr10:94449000-94451800	Active TSS	Liver	Liver
44	chr10:94449000-94451800	Bivalent/Poised TSS	Left Ventricle	heart
45	chr10:94449000-94452600	Active TSS	Lung	lung
46	chr10:94449000-94452600	Bivalent/Poised TSS	Skeletal Muscle Female	skeletal muscle
47	chr10:94449200-94450400	Active TSS	Primary neutrophils fromperipheralblood	blood
48	chr10:94449200-94450400	Active TSS	Primary hematopoietic stem cells short term culture	blood
49	chr10:94449200-94450400	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
50	chr10:94449200-94450400	Active TSS	Primary T helper naive cells fromperipheralblood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links