The 2.0 version of rSNPBase

Variant report

Variant rs569213820
Chromosome Location chr10:97208190-97208191
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97190800-97208200 Weak transcription H1 Cell Line embryonic stem cell
2 chr10:97193400-97210800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr10:97200200-97208800 Enhancers Colon Smooth Muscle Colon
4 chr10:97202800-97209200 Enhancers Fetal Muscle Leg muscle
5 chr10:97203200-97208400 Enhancers Liver Liver
6 chr10:97203800-97209400 Enhancers Breast Myoepithelial Primary Cells Breast
7 chr10:97204000-97208600 Enhancers Left Ventricle heart
8 chr10:97204600-97208200 Enhancers Cortex derived primary cultured neurospheres brain
9 chr10:97204600-97208200 Enhancers Placenta Placenta
10 chr10:97204600-97208200 Enhancers Lung lung
11 chr10:97204600-97208600 Enhancers Adipose Nuclei Adipose
12 chr10:97204600-97208600 Enhancers Fetal Stomach stomach
13 chr10:97204600-97208800 Enhancers Fetal Adrenal Gland Adrenal Gland
14 chr10:97204800-97208200 Enhancers Fetal Lung lung
15 chr10:97204800-97208600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
16 chr10:97204800-97209200 Enhancers Right Atrium heart
17 chr10:97204800-97209200 Enhancers Right Ventricle heart
18 chr10:97205000-97208200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
19 chr10:97205200-97211000 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr10:97205600-97208200 Enhancers HUVEC blood vessel
21 chr10:97205600-97209000 Enhancers Skeletal Muscle Female skeletal muscle
22 chr10:97205600-97210200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr10:97205800-97208200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr10:97206000-97208800 Enhancers Skeletal Muscle Male skeletal muscle
25 chr10:97206000-97210800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr10:97206000-97210800 Weak transcription Brain Anterior Caudate brain
27 chr10:97206000-97210800 Weak transcription Fetal Brain Male brain
28 chr10:97206000-97217000 Weak transcription Gastric stomach
29 chr10:97206000-97220000 Enhancers Rectal Smooth Muscle rectum
30 chr10:97206200-97208200 Weak transcription iPS-15b Cell Line embryonic stem cell
31 chr10:97206200-97208200 Weak transcription HMEC breast
32 chr10:97206200-97208600 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr10:97206200-97210800 Enhancers Fetal Heart heart
34 chr10:97206200-97219000 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr10:97206400-97208200 Weak transcription ES-WA7 Cell Line embryonic stem cell
36 chr10:97206600-97208200 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr10:97206600-97208400 Enhancers Psoas Muscle Psoas
38 chr10:97206600-97208600 Enhancers Duodenum Smooth Muscle Duodenum
39 chr10:97206600-97211000 Weak transcription Fetal Intestine Large intestine
40 chr10:97206600-97211400 Weak transcription Fetal Intestine Small intestine
41 chr10:97206800-97208600 Enhancers Fetal Muscle Trunk muscle
42 chr10:97206800-97208800 Enhancers Fetal Kidney kidney
43 chr10:97207000-97208600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
44 chr10:97207200-97208200 Enhancers Ovary ovary
45 chr10:97207200-97208200 Weak transcription Spleen Spleen
46 chr10:97207200-97208800 Enhancers HepG2 liver
47 chr10:97207400-97208400 Enhancers Aorta Aorta
48 chr10:97207400-97208600 Enhancers Brain Hippocampus Middle brain
49 chr10:97207400-97208600 Enhancers Brain Inferior Temporal Lobe brain
50 chr10:97207400-97208800 Enhancers Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015