Variant report

Variant	rs569262146
Chromosome Location	chr7:27176270-27176271
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr7:27175995-27176354	K562	blood:	n/a	n/a
2	POLR2A	chr7:27175422-27180699	MCF10A-Er-Src	breast:	n/a	n/a
3	POLR2A	chr7:27176027-27176363	HCT-116	colon:	n/a	n/a
4	CTCF	chr7:27175994-27176511	K562	blood:	n/a	n/a
5	ATF3	chr7:27175370-27176398	A549	lung:	n/a	n/a
6	GATA3	chr7:27175406-27176490	MCF-7	breast:	n/a	chr7:27175658-27175666 chr7:27175577-27175587
7	JUND	chr7:27175463-27176288	HepG2	liver:	n/a	chr7:27175724-27175734 chr7:27175724-27175734
8	EGR1	chr7:27175949-27176594	MCF-7	breast:	n/a	chr7:27176259-27176272 chr7:27176255-27176277 chr7:27176261-27176271
9	RAD21	chr7:27176016-27176304	K562	blood:	n/a	n/a
10	NR2F2	chr7:27175328-27176465	HepG2	liver:	n/a	chr7:27175945-27175960
11	CTCF	chr7:27176071-27176330	HepG2	liver:	n/a	n/a
12	FOS	chr7:27175571-27176356	MCF10A-Er-Src	breast:	n/a	chr7:27175724-27175734 chr7:27175723-27175734 chr7:27175724-27175734
13	STAT3	chr7:27176022-27176337	MCF10A-Er-Src	breast:	n/a	n/a
14	POLR2A	chr7:27176047-27176501	MCF10A-Er-Src	breast:	n/a	n/a
15	EP300	chr7:27175238-27176550	A549	lung:	n/a	chr7:27175562-27175571
16	CTCF	chr7:27176120-27176270	HCT-116	colon:	n/a	n/a
17	FOXA2	chr7:27176081-27176524	A549	lung:	n/a	chr7:27176424-27176436
18	STAT3	chr7:27175896-27176349	MCF10A-Er-Src	breast:	n/a	n/a
19	MAX	chr7:27175295-27176528	A549	lung:	n/a	n/a
20	CTCF	chr7:27176100-27176292	H1-hESC	embryonic stem cell:	n/a	n/a
21	RAD21	chr7:27175307-27176557	HCT-116	colon:	n/a	chr7:27176392-27176401
22	SMC3	chr7:27176029-27176361	K562	blood:	n/a	n/a
23	RAD21	chr7:27175995-27176388	H1-hESC	embryonic stem cell:	n/a	n/a
24	CTCF	chr7:27176180-27176330	BE2_C	brain:	n/a	n/a
25	RAD21	chr7:27175355-27176448	IMR90	lung:	n/a	chr7:27176392-27176401
26	CTCF	chr7:27176083-27176324	MCF-7	breast:	n/a	n/a
27	CTCF	chr7:27175942-27176410	HepG2	liver:	n/a	n/a
28	CTCF	chr7:27176073-27176318	Spleen_OC	spleen:	n/a	n/a
29	CTCF	chr7:27176140-27176290	AG04450	lung:	n/a	n/a
30	GABPA	chr7:27175988-27176432	A549	lung:	n/a	chr7:27176258-27176272
31	ARID3A	chr7:27175249-27176352	HepG2	liver:	n/a	chr7:27176106-27176122
32	HDAC2	chr7:27175462-27176369	MCF-7	breast:	n/a	chr7:27176054-27176068
33	CTCF	chr7:27176120-27176270	NB4	blood:	n/a	n/a
34	TCF7L2	chr7:27175499-27176365	HEK293	kidney:	n/a	n/a
35	POLR2A	chr7:27175568-27176446	PANC-1	pancreas:	n/a	n/a
36	RAD21	chr7:27175940-27176443	ECC-1	luminal epithelium:	n/a	chr7:27176392-27176401
37	SMC3	chr7:27175476-27176394	HepG2	liver:	n/a	n/a
38	SP1	chr7:27175391-27176459	HCT-116	colon:	n/a	n/a
39	CTCF	chr7:27175951-27176408	T-47D	breast:	n/a	n/a
40	CTCF	chr7:27176082-27176323	MCF-7	breast:	n/a	n/a
41	E2F4	chr7:27175936-27176381	MCF10A-Er-Src	breast:	n/a	n/a
42	CTCF	chr7:27175976-27176464	MCF-7	breast:	n/a	n/a
43	CTCF	chr7:27176120-27176270	HPF	lung:	n/a	n/a
44	CTCF	chr7:27176140-27176290	NHDF-neo	bronchial:	n/a	n/a
45	CTCF	chr7:27176120-27176270	HPAF	blood vessel:	n/a	n/a
46	CTCF	chr7:27176054-27176350	Gliobla	brain:	n/a	n/a
47	CTCF	chr7:27176027-27176290	HepG2	liver:	n/a	n/a
48	RAD21	chr7:27175912-27176472	H1-hESC	embryonic stem cell:	n/a	chr7:27176392-27176401
49	CTCF	chr7:27176055-27176341	NHEK	skin:	n/a	n/a
50	CTCF	chr7:27176120-27176270	SK-N-SH_RA	brain:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	7:27173201-27176959..7:27238414-27242313	H1-hESC	embryonic stem cell:	embryo
2	chr7:26721088..26721712-chr7:27175807..27176765,2	MCF-7	breast:
3	7:27158219-27162022..7:27173201-27176959	H1-hESC	embryonic stem cell:	embryo
4	7:27143270-27156413..7:27173201-27176959	H1-hESC	embryonic stem cell:	embryo
5	chr7:27168902..27171913-chr7:27172340..27176747,4	K562	blood:
6	7:27173201-27176959..7:27203007-27207968	H1-hESC	embryonic stem cell:	embryo
7	chr7:26892969..26894016-chr7:27175632..27176342,3	MCF-7	breast:
8	chr7:26725771..26726610-chr7:27176008..27176865,3	MCF-7	breast:
9	chr7:26899720..26900649-chr7:27175363..27176615,9	MCF-7	breast:
10	chr7:26903826..26904489-chr7:27175411..27176270,2	MCF-7	breast:
11	chr7:27134844..27136914-chr7:27174495..27176327,2	MCF-7	breast:
12	chr7:26903264..26905993-chr7:27172832..27179682,7	MCF-7	breast:
13	chr7:26893107..26894049-chr7:27175583..27176696,5	MCF-7	breast:
14	chr7:26899915..26900635-chr7:27175507..27176745,4	MCF-7	breast:
15	chr7:27175229..27177750-chr7:27182506..27185033,2	MCF-7	breast:
16	chr7:26897524..26906359-chr7:27169396..27177834,18	MCF-7	breast:

Variant related genes	Relation type
HOXA-AS3	TF binding region
ENSG00000197576	Chromatin interaction
ENSG00000253552	Chromatin interaction
ENSG00000106004	Chromatin interaction
ENSG00000078399	Chromatin interaction
ENSG00000106031	Chromatin interaction
ENSG00000105991	Chromatin interaction
ENSG00000005020	Chromatin interaction
ENSG00000233429	Chromatin interaction
ENSG00000105997	Chromatin interaction
ENSG00000243766	Chromatin interaction
ENSG00000254369	Chromatin interaction

Extended variants
information (count: 42 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:42 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1025538	chr7:26482342-27376045	Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	213 gene(s)	inside rSNPs	diseases
2	nsv538805	chr7:26482342-27376045	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Strong transcription Flanking Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	213 gene(s)	inside rSNPs	diseases
3	nsv1018709	chr7:26990384-27216552	Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	140 gene(s)	inside rSNPs	diseases
4	nsv538806	chr7:26990384-27216552	Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	140 gene(s)	inside rSNPs	diseases
5	nsv887856	chr7:27073731-27297791	Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
6	nsv824038	chr7:27119294-27284522	Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
7	nsv887857	chr7:27120689-27229549	Bivalent Enhancer Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	176 gene(s)	inside rSNPs	diseases
8	nsv824039	chr7:27121825-27294951	Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
9	nsv824040	chr7:27121870-27295010	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
10	nsv887858	chr7:27127231-27188659	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	57 gene(s)	inside rSNPs	diseases
11	nsv887860	chr7:27127231-27196069	Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
12	nsv887859	chr7:27127231-27196113	Bivalent Enhancer Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
13	nsv887861	chr7:27127231-27206688	Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
14	nsv887862	chr7:27127231-27217359	Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	141 gene(s)	inside rSNPs	diseases
15	nsv887863	chr7:27127231-27243106	Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
16	nsv887864	chr7:27127231-27243962	Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
17	nsv887865	chr7:27127231-27247279	Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
18	nsv887866	chr7:27127231-27248373	Bivalent/Poised TSS Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
19	nsv887867	chr7:27127231-27252246	Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
20	nsv824041	chr7:27128039-27294951	Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
21	nsv606463	chr7:27135314-27182245	Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
22	nsv887868	chr7:27135314-27202289	Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
23	nsv887869	chr7:27135314-27297791	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
24	nsv887871	chr7:27136308-27179814	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
25	nsv887872	chr7:27136308-27181437	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
26	nsv887873	chr7:27136308-27186495	Bivalent/Poised TSS Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
27	nsv887874	chr7:27136308-27196069	Bivalent/Poised TSS Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
28	nsv1020608	chr7:27139892-27324004	Bivalent Enhancer Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
29	nsv538807	chr7:27139892-27324004	Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
30	nsv1033316	chr7:27140645-27237951	Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	178 gene(s)	inside rSNPs	diseases
31	nsv606465	chr7:27143757-27229549	Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	174 gene(s)	inside rSNPs	diseases
32	nsv606466	chr7:27145024-27197319	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
33	nsv606467	chr7:27145100-27196113	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
34	nsv887875	chr7:27145100-27243962	Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	179 gene(s)	inside rSNPs	diseases
35	nsv532118	chr7:27146920-27354205	Flanking Active TSS Bivalent Enhancer Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
36	nsv5674	chr7:27152562-27197341	Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
37	nsv887876	chr7:27168858-27196069	Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
38	nsv824042	chr7:27169231-27247232	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	157 gene(s)	inside rSNPs	diseases
39	nsv887877	chr7:27169388-27217359	Bivalent Enhancer Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	115 gene(s)	inside rSNPs	diseases
40	esv1824277	chr7:27169934-27176966	Active TSS Bivalent Enhancer Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
41	nsv887878	chr7:27175295-27214557	Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
42	nsv887879	chr7:27175295-27297791	Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	151 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:55 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:27171200-27176400	Weak transcription	Lung	lung
2	chr7:27171200-27181400	Weak transcription	Esophagus	oesophagus
3	chr7:27172600-27178400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr7:27173000-27176400	Enhancers	Adipose Nuclei	Adipose
5	chr7:27173000-27176800	Enhancers	NHEK	skin
6	chr7:27173400-27177600	Enhancers	Muscle Satellite Cultured Cells	--
7	chr7:27173600-27177600	Enhancers	Primary hematopoietic stem cells	blood
8	chr7:27173800-27176400	Weak transcription	Psoas Muscle	Psoas
9	chr7:27173800-27178400	Enhancers	Fetal Intestine Small	intestine
10	chr7:27173800-27178600	Enhancers	Colon Smooth Muscle	Colon
11	chr7:27173800-27179200	Genic enhancers	Primary hematopoietic stem cells short term culture	blood
12	chr7:27175000-27176800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr7:27175000-27177200	Bivalent Enhancer	Fetal Thymus	thymus
14	chr7:27175000-27177400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
15	chr7:27175200-27176600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr7:27175200-27176600	Enhancers	Stomach Mucosa	stomach
17	chr7:27175400-27176600	Flanking Active TSS	HUVEC	blood vessel
18	chr7:27175600-27176400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
19	chr7:27175600-27176600	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr7:27175600-27176600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr7:27175600-27177800	Enhancers	Skeletal Muscle Female	skeletal muscle
22	chr7:27175600-27179200	Genic enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
23	chr7:27175800-27176400	Enhancers	Fetal Muscle Leg	muscle
24	chr7:27175800-27176400	Weak transcription	Sigmoid Colon	Sigmoid Colon
25	chr7:27175800-27176600	Active TSS	Duodenum Smooth Muscle	Duodenum
26	chr7:27175800-27176600	Flanking Active TSS	Fetal Intestine Large	intestine
27	chr7:27175800-27176600	Flanking Active TSS	Osteobl	bone
28	chr7:27175800-27177200	Enhancers	Fetal Muscle Trunk	muscle
29	chr7:27175800-27177200	Enhancers	HSMM	muscle
30	chr7:27175800-27177600	Enhancers	HSMMtube	muscle
31	chr7:27175800-27178200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
32	chr7:27175800-27178200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
33	chr7:27175800-27178200	Enhancers	Skeletal Muscle Male	skeletal muscle
34	chr7:27175800-27178800	Genic enhancers	NHDF-Ad	bronchial
35	chr7:27175800-27179000	Genic enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr7:27175800-27184800	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
37	chr7:27176000-27176400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
38	chr7:27176000-27176400	Enhancers	Rectal Smooth Muscle	rectum
39	chr7:27176000-27176400	Active TSS	Stomach Smooth Muscle	stomach
40	chr7:27176000-27176400	Active TSS	A549	lung
41	chr7:27176000-27176400	Active TSS	NHLF	lung
42	chr7:27176000-27176800	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
43	chr7:27176000-27177400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr7:27176000-27178000	Enhancers	Fetal Stomach	stomach
45	chr7:27176000-27178200	Enhancers	HMEC	breast
46	chr7:27176200-27176400	Bivalent Enhancer	Brain Germinal Matrix	brain
47	chr7:27176200-27176600	Enhancers	Colonic Mucosa	Colon
48	chr7:27176200-27176600	Bivalent Enhancer	Fetal Lung	lung
49	chr7:27176200-27176600	Enhancers	Rectal Mucosa Donor 29	rectum
50	chr7:27176200-27176600	Enhancers	Rectal Mucosa Donor 31	rectum

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