Variant report

Variant rs56943541
Chromosome Location chr3:195515723-195515724
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195485000-195517200 Weak transcription Right Atrium heart
2 chr3:195503000-195528800 Weak transcription H9 Cell Line embryonic stem cell
3 chr3:195505600-195532200 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr3:195508200-195521600 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr3:195509800-195518000 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr3:195512200-195529200 Weak transcription Rectal Smooth Muscle rectum
7 chr3:195512600-195528200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr3:195513000-195519000 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr3:195513200-195516000 Weak transcription Placenta Placenta
10 chr3:195513200-195517800 Weak transcription Pancreas Pancrea
11 chr3:195515000-195517000 Enhancers Primary T helper cells PMA-I stimulated --
12 chr3:195515000-195517200 Enhancers Primary Natural Killer cells fromperipheralblood blood
13 chr3:195515000-195518200 Strong transcription Sigmoid Colon Sigmoid Colon
14 chr3:195515200-195515800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
15 chr3:195515200-195515800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
16 chr3:195515200-195516000 ZNF genes & repeats Esophagus oesophagus
17 chr3:195515200-195516000 Enhancers Spleen Spleen
18 chr3:195515200-195516200 Enhancers Primary B cells from peripheral blood blood
19 chr3:195515200-195516400 Enhancers Primary T helper 17 cells PMA-I stimulated --
20 chr3:195515200-195516600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr3:195515200-195516800 Enhancers Primary T helper naive cells fromperipheralblood blood
22 chr3:195515200-195516800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
23 chr3:195515200-195516800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
24 chr3:195515200-195517000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
25 chr3:195515200-195517000 Enhancers Primary T helper cells fromperipheralblood blood
26 chr3:195515200-195517400 Strong transcription Colonic Mucosa Colon
27 chr3:195515200-195517600 Enhancers Primary T killer naive cells fromperipheralblood blood
28 chr3:195515200-195518400 Strong transcription Placenta Amnion Placenta Amnion
29 chr3:195515200-195518400 Strong transcription Rectal Mucosa Donor 29 rectum
30 chr3:195515200-195520600 Strong transcription Rectal Mucosa Donor 31 rectum
31 chr3:195515400-195516200 Enhancers Primary T regulatory cells fromperipheralblood blood
32 chr3:195515400-195516200 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
33 chr3:195515400-195516400 Enhancers Primary T cells from cord blood blood
34 chr3:195515600-195515800 Active TSS Gastric stomach
35 chr3:195515600-195517000 Enhancers Primary T cells fromperipheralblood blood
36 chr3:195515600-195517800 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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