The 2.0 version of rSNPBase

Variant report

Variant rs569466982
Chromosome Location chr1:168436849-168436850
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:168433800-168443400 Weak transcription Liver Liver
2 chr1:168434000-168437000 Enhancers Primary hematopoietic stem cells short term culture blood
3 chr1:168434400-168443600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr1:168434800-168439200 Enhancers Dnd41 blood
5 chr1:168434800-168440800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr1:168435000-168437000 Enhancers Primary T killer naive cells fromperipheralblood blood
7 chr1:168435000-168437600 Enhancers Fetal Intestine Small intestine
8 chr1:168435000-168437800 Enhancers Fetal Kidney kidney
9 chr1:168435000-168438400 Enhancers Primary hematopoietic stem cells blood
10 chr1:168435000-168438400 Enhancers Placenta Amnion Placenta Amnion
11 chr1:168435000-168439600 Enhancers HSMMtube muscle
12 chr1:168435000-168440400 Enhancers Primary T helper cells fromperipheralblood blood
13 chr1:168435000-168440600 Enhancers Primary T helper naive cells from peripheral blood blood
14 chr1:168435000-168440600 Enhancers Rectal Smooth Muscle rectum
15 chr1:168435200-168437000 Enhancers Primary T helper naive cells fromperipheralblood blood
16 chr1:168435200-168437400 Enhancers Fetal Intestine Large intestine
17 chr1:168435200-168437800 Enhancers Primary monocytes fromperipheralblood blood
18 chr1:168435200-168437800 Enhancers Colonic Mucosa Colon
19 chr1:168435200-168437800 Enhancers Rectal Mucosa Donor 29 rectum
20 chr1:168435200-168438200 Flanking Active TSS GM12878-XiMat blood
21 chr1:168435200-168439400 Enhancers Primary T cells fromperipheralblood blood
22 chr1:168435200-168439800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:168435200-168439800 Enhancers NHDF-Ad bronchial
24 chr1:168435200-168440000 Enhancers Primary T cells from cord blood blood
25 chr1:168435200-168440200 Enhancers Muscle Satellite Cultured Cells --
26 chr1:168435200-168440400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:168435200-168440400 Enhancers Breast Myoepithelial Primary Cells Breast
28 chr1:168435200-168440400 Enhancers HSMM muscle
29 chr1:168435200-168440600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr1:168435200-168440600 Enhancers Colon Smooth Muscle Colon
31 chr1:168435200-168440600 Enhancers Skeletal Muscle Female skeletal muscle
32 chr1:168435200-168440600 Enhancers HMEC breast
33 chr1:168435200-168440600 Enhancers NHEK skin
34 chr1:168435200-168440800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr1:168435400-168437400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
36 chr1:168435400-168437600 Enhancers Monocytes-CD14+_RO01746 blood
37 chr1:168435400-168439200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:168435400-168439800 Enhancers Adipose Nuclei Adipose
39 chr1:168435400-168439800 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr1:168435400-168440600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr1:168435600-168437000 Weak transcription H9 Cell Line embryonic stem cell
42 chr1:168435600-168437200 Enhancers Stomach Mucosa stomach
43 chr1:168435600-168437400 Enhancers Primary B cells from peripheral blood blood
44 chr1:168435600-168437600 Enhancers Primary B cells from cord blood blood
45 chr1:168435600-168437800 Enhancers Duodenum Smooth Muscle Duodenum
46 chr1:168435600-168439000 Weak transcription Ovary ovary
47 chr1:168435800-168438000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:168435800-168438200 Enhancers ES-I3 Cell Line embryonic stem cell
49 chr1:168435800-168438200 Weak transcription Left Ventricle heart
50 chr1:168435800-168438200 Weak transcription Pancreas Pancrea

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015