Variant report

Variant rs56957622
Chromosome Location chr1:247499748-247499749
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:247496200-247503000 Weak transcription Aorta Aorta
2 chr1:247496400-247501600 Enhancers Primary hematopoietic stem cells blood
3 chr1:247496400-247511000 Weak transcription Primary B cells from cord blood blood
4 chr1:247496600-247500400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr1:247496600-247501000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
6 chr1:247496600-247501000 Weak transcription NHDF-Ad bronchial
7 chr1:247496600-247505800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr1:247496600-247506000 Weak transcription HSMMtube muscle
9 chr1:247496600-247511000 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr1:247496800-247500400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr1:247496800-247500800 Weak transcription Ovary ovary
12 chr1:247496800-247501200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr1:247496800-247501200 Genic enhancers Fetal Muscle Leg muscle
14 chr1:247496800-247501400 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
15 chr1:247496800-247502000 Weak transcription HSMM muscle
16 chr1:247496800-247502200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr1:247496800-247503000 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr1:247496800-247507200 Weak transcription Fetal Intestine Large intestine
19 chr1:247496800-247510200 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr1:247497000-247500000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr1:247497000-247501600 Enhancers ES-I3 Cell Line embryonic stem cell
22 chr1:247497000-247503000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr1:247497000-247504000 Weak transcription Stomach Mucosa stomach
24 chr1:247497000-247511200 Weak transcription Esophagus oesophagus
25 chr1:247497200-247500800 Enhancers ES-WA7 Cell Line embryonic stem cell
26 chr1:247497200-247500800 Weak transcription Brain Hippocampus Middle brain
27 chr1:247497200-247502200 Weak transcription Muscle Satellite Cultured Cells --
28 chr1:247497200-247503000 Weak transcription NHEK skin
29 chr1:247497200-247505800 Weak transcription Brain Substantia Nigra brain
30 chr1:247497200-247506200 Weak transcription HMEC breast
31 chr1:247497200-247509800 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr1:247497200-247516000 Weak transcription Placenta Amnion Placenta Amnion
33 chr1:247497400-247499800 Enhancers Brain Inferior Temporal Lobe brain
34 chr1:247497400-247500000 Enhancers Skeletal Muscle Female skeletal muscle
35 chr1:247497400-247500000 Weak transcription Osteobl bone
36 chr1:247497400-247500600 Weak transcription Fetal Brain Male brain
37 chr1:247497400-247503000 Weak transcription Duodenum Mucosa Duodenum
38 chr1:247497400-247511200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr1:247497400-247511400 Weak transcription Primary T cells from cord blood blood
40 chr1:247497800-247501400 Enhancers H1 Cell Line embryonic stem cell
41 chr1:247497800-247502800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr1:247497800-247506400 Weak transcription GM12878-XiMat blood
43 chr1:247498000-247499800 Enhancers Right Atrium heart
44 chr1:247498000-247500400 Weak transcription NHLF lung
45 chr1:247498000-247502800 Weak transcription Hela-S3 cervix
46 chr1:247498200-247501400 Weak transcription HepG2 liver
47 chr1:247498200-247501800 Enhancers Fetal Adrenal Gland Adrenal Gland
48 chr1:247498200-247501800 Weak transcription Psoas Muscle Psoas
49 chr1:247498400-247499800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr1:247498400-247499800 Enhancers Lung lung

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