The 2.0 version of rSNPBase

Variant report

Variant rs569609484
Chromosome Location chr3:24282443-24282444
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:24262200-24283200 Weak transcription Fetal Stomach stomach
2 chr3:24262600-24283200 Weak transcription Left Ventricle heart
3 chr3:24263000-24283000 Weak transcription Brain Cingulate Gyrus brain
4 chr3:24267000-24283000 Weak transcription Brain Inferior Temporal Lobe brain
5 chr3:24267000-24283800 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr3:24268200-24291000 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr3:24272400-24301400 Weak transcription Fetal Intestine Large intestine
8 chr3:24274400-24282800 Weak transcription Right Ventricle heart
9 chr3:24275200-24282600 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr3:24276600-24286200 Weak transcription Liver Liver
11 chr3:24276800-24283200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr3:24276800-24283800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr3:24277000-24282800 Weak transcription Fetal Muscle Leg muscle
14 chr3:24277000-24283400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr3:24277200-24286200 Weak transcription HepG2 liver
16 chr3:24277400-24283400 Weak transcription Pancreas Pancrea
17 chr3:24279400-24283800 Weak transcription Placenta Amnion Placenta Amnion
18 chr3:24279600-24283000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr3:24279600-24283200 Weak transcription Aorta Aorta
20 chr3:24279600-24283400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr3:24279600-24291400 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr3:24279800-24283400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr3:24280000-24282600 Weak transcription Brain Germinal Matrix brain
24 chr3:24280000-24283000 Weak transcription Fetal Brain Male brain
25 chr3:24280000-24283200 Weak transcription Brain Hippocampus Middle brain
26 chr3:24280000-24283400 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr3:24280200-24283000 Weak transcription HUVEC blood vessel
28 chr3:24280200-24283200 Weak transcription Brain Angular Gyrus brain
29 chr3:24280200-24283200 Weak transcription Stomach Mucosa stomach
30 chr3:24280200-24283400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr3:24280200-24283400 Weak transcription Fetal Lung lung
32 chr3:24280200-24283400 Weak transcription A549 lung
33 chr3:24280400-24283200 Weak transcription Fetal Brain Female brain
34 chr3:24280400-24283200 Weak transcription NHEK skin
35 chr3:24280400-24283400 Weak transcription NH-A brain
36 chr3:24280400-24283400 Weak transcription NHLF lung
37 chr3:24280400-24283600 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr3:24280600-24282800 Weak transcription Adipose Nuclei Adipose
39 chr3:24280600-24283000 Weak transcription HMEC breast
40 chr3:24280600-24283200 Weak transcription Muscle Satellite Cultured Cells --
41 chr3:24280600-24283200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr3:24280600-24283400 Weak transcription HSMM muscle
43 chr3:24280800-24282800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr3:24280800-24282800 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr3:24280800-24282800 Weak transcription Stomach Smooth Muscle stomach
46 chr3:24280800-24283000 Weak transcription Colon Smooth Muscle Colon
47 chr3:24280800-24283200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr3:24280800-24283200 Weak transcription Rectal Smooth Muscle rectum
49 chr3:24280800-24283200 Weak transcription HSMMtube muscle
50 chr3:24280800-24283400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015