| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv817539 |
chr15:54132584-55095235 |
Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1038660 |
chr15:54756184-55039913 |
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv904236 |
chr15:54820897-54912439 |
Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1039548 |
chr15:54856965-54914519 |
Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv569508 |
chr15:54876212-54904782 |
Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Strong transcription Active TSS
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv526413 |
chr15:54876423-54904782 |
Enhancers Weak transcription Bivalent Enhancer Strong transcription ZNF genes & repeats Active TSS
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv904237 |
chr15:54888537-54927484 |
Enhancers Weak transcription Strong transcription Bivalent Enhancer Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv569509 |
chr15:54888537-54932716 |
Enhancers Weak transcription Bivalent Enhancer Active TSS Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
esv3312449 |
chr15:54890485-54893511 |
Strong transcription Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 10 |
esv3312450 |
chr15:54890485-54893511 |
Weak transcription Enhancers Strong transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 11 |
esv11366 |
chr15:54890805-54893062 |
Strong transcription Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page:
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