Variant report

Variant	rs569741129
Chromosome Location	chr7:37998430-37998431
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv8074	chr7:37865340-38210087	ZNF genes & repeats Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	esv3381958	chr7:37997777-37999875	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv2589907	chr7:37997999-37999698	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv3323541	chr7:37998277-37999325	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv2270289	chr7:37998317-37999018	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv7131	chr7:37998322-37999068	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3073	chr7:37998385-37998925	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3475962	chr7:37998408-37998931	Weak transcription	n/a	n/a	inside rSNPs	diseases
9	esv3486061	chr7:37998410-37998932	Weak transcription	n/a	n/a	inside rSNPs	diseases
10	esv3486066	chr7:37998419-37998909	Weak transcription	n/a	n/a	inside rSNPs	diseases
11	esv3486062	chr7:37998428-37998872	Weak transcription	n/a	n/a	inside rSNPs	diseases
12	esv3486067	chr7:37998430-37998859	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:37989400-37998800	Weak transcription	Thymus	Thymus
2	chr7:37992200-38017600	Weak transcription	Ovary	ovary
3	chr7:37992600-37999200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr7:37992600-38026800	Weak transcription	Pancreas	Pancrea
5	chr7:37993000-38007600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
6	chr7:37993400-37999600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr7:37993800-38007400	Weak transcription	A549	lung
8	chr7:37997600-38010600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr7:37997800-38005000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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