Variant report

Variant	rs56987209
Chromosome Location	chr7:18826091-18826092
allele	-/CCTT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531368	chr7:18677922-18836920	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv498112	chr7:18677922-18991946	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv887813	chr7:18720135-18995552	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv887814	chr7:18751998-18886177	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	esv3475748	chr7:18825964-18826575	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
6	esv3360970	chr7:18825990-18826548	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
7	esv3518015	chr7:18826016-18826524	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
8	esv3475749	chr7:18826024-18826499	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
9	esv3475747	chr7:18826026-18826506	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
10	esv3518014	chr7:18826038-18826512	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
11	esv3518016	chr7:18826083-18826410	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
12	esv3374166	chr7:18826089-18826450	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
13	esv1519826	chr7:18826091-18826107	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:18790600-18835000	Weak transcription	Primary B cells from cord blood	blood
2	chr7:18812400-18826400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr7:18818600-18832200	Weak transcription	Osteobl	bone
4	chr7:18818800-18832400	Weak transcription	HSMMtube	muscle
5	chr7:18822200-18827000	Weak transcription	Adipose Nuclei	Adipose
6	chr7:18822600-18826600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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