The 2.0 version of rSNPBase

Variant report

Variant rs569913922
Chromosome Location chr13:30353997-30353998
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30330600-30355000 Weak transcription Rectal Smooth Muscle rectum
2 chr13:30333200-30360200 Weak transcription Pancreas Pancrea
3 chr13:30333200-30368200 Weak transcription Aorta Aorta
4 chr13:30333400-30357000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr13:30333600-30376200 Weak transcription Primary hematopoietic stem cells blood
6 chr13:30335200-30356800 Weak transcription GM12878-XiMat blood
7 chr13:30336400-30357000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr13:30337600-30363000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr13:30337800-30359800 Weak transcription HMEC breast
10 chr13:30338400-30354000 Weak transcription Colon Smooth Muscle Colon
11 chr13:30338400-30360000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr13:30338400-30360000 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr13:30338600-30357000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr13:30339000-30360200 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr13:30339000-30364200 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr13:30341200-30373200 Weak transcription HUES6 Cell Line embryonic stem cell
17 chr13:30341400-30360200 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr13:30341600-30356800 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr13:30341600-30357200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr13:30341600-30360200 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr13:30341800-30354000 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr13:30341800-30354400 Weak transcription Adipose Nuclei Adipose
23 chr13:30341800-30359800 Weak transcription Duodenum Mucosa Duodenum
24 chr13:30341800-30360200 Weak transcription Left Ventricle heart
25 chr13:30341800-30360400 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr13:30341800-30363600 Weak transcription HSMM muscle
27 chr13:30341800-30365000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr13:30342000-30356800 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr13:30342000-30357000 Weak transcription NHDF-Ad bronchial
30 chr13:30342000-30359800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr13:30343400-30356600 Weak transcription Liver Liver
32 chr13:30343800-30360200 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr13:30344000-30357000 Weak transcription Osteobl bone
34 chr13:30344400-30359600 Weak transcription Primary T cells from cord blood blood
35 chr13:30344400-30360200 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr13:30345800-30360200 Weak transcription Small Intestine intestine
37 chr13:30346600-30359800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr13:30347600-30361800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr13:30347800-30361400 Weak transcription A549 lung
40 chr13:30349200-30360200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr13:30349800-30364400 Weak transcription Pancreatic Islets Pancreatic Islet
42 chr13:30350000-30360000 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr13:30350200-30357600 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr13:30350200-30358200 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr13:30350200-30361800 Weak transcription Fetal Lung lung
46 chr13:30350400-30354000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr13:30350400-30359800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr13:30350400-30361800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr13:30350800-30356800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr13:30350800-30359800 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015