Variant report

Variant	rs570056447
Chromosome Location	chr11:71851345-71851346
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530623	chr11:71088949-72020418	Enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	134 gene(s)	inside rSNPs	diseases
2	nsv1054858	chr11:71847797-71880291	Enhancers Flanking Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	esv3493111	chr11:71850822-71893073	Weak transcription Genic enhancers Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
4	esv3493112	chr11:71850822-71893073	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:71846800-71853400	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr11:71847800-71851400	Transcr. at gene 5' and 3'	Primary neutrophils fromperipheralblood	blood
3	chr11:71848000-71852000	Weak transcription	HSMMtube	muscle
4	chr11:71848000-71852600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
5	chr11:71848400-71854600	Weak transcription	Primary hematopoietic stem cells	blood
6	chr11:71848800-71851600	Transcr. at gene 5' and 3'	Monocytes-CD14+_RO01746	blood
7	chr11:71849200-71852800	Weak transcription	Skeletal Muscle Female	skeletal muscle
8	chr11:71849800-71853600	Genic enhancers	Primary monocytes fromperipheralblood	blood
9	chr11:71850400-71852000	Enhancers	NHEK	skin
10	chr11:71850600-71851800	Strong transcription	Spleen	Spleen
11	chr11:71850600-71852400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr11:71850600-71852400	Enhancers	HSMM	muscle
13	chr11:71850600-71853400	Enhancers	NHDF-Ad	bronchial
14	chr11:71850800-71852000	Enhancers	Muscle Satellite Cultured Cells	--
15	chr11:71850800-71852400	Enhancers	Osteobl	bone
16	chr11:71850800-71853000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr11:71850800-71853200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr11:71850800-71853400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr11:71850800-71853400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
20	chr11:71850800-71853600	Enhancers	Hela-S3	cervix
21	chr11:71850800-71856200	Enhancers	HMEC	breast
22	chr11:71851000-71851800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr11:71851000-71852000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr11:71851000-71852000	Enhancers	NH-A	brain
25	chr11:71851000-71852800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr11:71851000-71853200	Enhancers	Placenta	Placenta
27	chr11:71851000-71853400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
28	chr11:71851200-71851800	Weak transcription	Placenta Amnion	Placenta Amnion
29	chr11:71851200-71851800	Weak transcription	NHLF	lung
30	chr11:71851200-71852400	Weak transcription	Primary B cells from cord blood	blood
31	chr11:71851200-71852400	Weak transcription	A549	lung
32	chr11:71851200-71856200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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