Variant report

Variant	rs570173570
Chromosome Location	chr7:87343981-87343982
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:61)
Chromatin interactive
region (count:0)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:87343956-87344006	HAEpiC	amniotic membrane:	n/a
2	chr7:87343956-87344006	Caco-2	colon:	n/a
3	chr7:87343956-87344006	SK-N-MC	brain:	n/a
4	chr7:87343956-87344006	AG10803	skin:	n/a
5	chr7:87343956-87344006	HPAEpiC	pulmonary alveolar:	n/a
6	chr7:87343956-87344006	HRPEpiC	eye:	n/a
7	chr7:87343956-87344006	HCF	heart:	n/a
8	chr7:87343956-87344006	HIPEpiC	eye:	n/a
9	chr7:87343956-87344006	GM12891	blood:	n/a
10	chr7:87343956-87344006	HRE	kidney:	n/a
11	chr7:87343956-87344006	AG04449	skin:	fetal
12	chr7:87343956-87344006	SKMC	muscle:	n/a
13	chr7:87343956-87344006	AG04450	lung:	fetal
14	chr7:87343956-87344006	H1-hESC	embryonic stem cell:	embryo
15	chr7:87343956-87344006	HCT-116	colon:	n/a
16	chr7:87343956-87344006	NHDF-neo	bronchial:	n/a
17	chr7:87343956-87344006	HUVEC	blood vessel:	n/a
18	chr7:87343956-87344006	ECC-1	luminal epithelium:	n/a
19	chr7:87343956-87344006	MCF-7	breast:	n/a
20	chr7:87343956-87344006	GM12892	blood:	n/a
21	chr7:87343956-87344006	HL-60	blood:	n/a
22	chr7:87343956-87344006	BJ	skin:	n/a
23	chr7:87343956-87344006	PrEC	prostate:	n/a
24	chr7:87343956-87344006	AG09319	gingival:	n/a
25	chr7:87343956-87344006	NT2-D1	testis:	n/a
26	chr7:87343956-87344006	Hepatocyte	liver:	n/a
27	chr7:87343956-87344006	ProgFib	skin:	n/a
28	chr7:87343956-87344006	HRCEpiC	kidney:	n/a
29	chr7:87343956-87344006	IMR90	lung:	fetal
30	chr7:87343956-87344006	NHBE	bronchial:	n/a
31	chr7:87343956-87344006	MCF10A-Er-Src	breast:	n/a
32	chr7:87343956-87344006	GM19239	blood:	n/a
33	chr7:87343956-87344006	HMEC	breast:	n/a
34	chr7:87343956-87344006	HNPCEpiC	eye:	n/a
35	chr7:87343956-87344006	BE2_C	brain:	n/a
36	chr7:87343956-87344006	RPTEC	kidney:	n/a
37	chr7:87343956-87344006	SAEC	small airway:	n/a
38	chr7:87343956-87344006	T-47D	breast:	n/a
39	chr7:87343956-87344006	AoSMC	blood vessel:	n/a
40	chr7:87343956-87344006	HEK293	kidney:	embryo
41	chr7:87343956-87344006	Jurkat	blood:	n/a
42	chr7:87343956-87344006	CMK	blood:	n/a
43	chr7:87343956-87344006	PANC-1	pancreas:	n/a
44	chr7:87343956-87344006	GM06990	blood:	n/a
45	chr7:87343956-87344006	GM12878	blood:	n/a
46	chr7:87343956-87344006	LNCaP	prostate:	n/a
47	chr7:87343956-87344006	ovcar-3	ovarian:	n/a
48	chr7:87343956-87344006	NB4	blood:	n/a
49	chr7:87343956-87344006	PFSK-1	brain:	n/a
50	chr7:87343956-87344006	K562	blood:	n/a

No data

Variant related genes	Relation type
ABCB1	CpG island

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv888677	chr7:86802025-87781111	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
2	nsv464622	chr7:86832603-87541248	Weak transcription Flanking Active TSS Genic enhancers Enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
3	nsv607725	chr7:86832603-87541248	Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
4	nsv1015862	chr7:87075394-88049798	Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
5	nsv607729	chr7:87326929-87352572	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	nsv888695	chr7:87328502-87430669	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
7	nsv607730	chr7:87330423-87352572	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
8	esv1814479	chr7:87338467-87346819	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island lncRNA	2 gene(s)	inside rSNPs	diseases
9	esv3340641	chr7:87343816-87345864	Enhancers Weak transcription	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:87332600-87360000	Weak transcription	Liver	Liver

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