Variant report

Variant	rs570245276
Chromosome Location	chr3:24090833-24090834
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:24082962..24085298-chr3:24090200..24092155,2	K562	blood:
2	chr3:24086798..24089297-chr3:24089834..24092711,2	K562	blood:

Extended variants
information (count: 23 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:23 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533980	chr3:23445901-24311972	ZNF genes & repeats Strong transcription Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
2	nsv834638	chr3:23963860-24117191	Enhancers Weak transcription Active TSS Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
3	nsv834639	chr3:24037113-24233925	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
4	nsv1004037	chr3:24064777-24143719	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
5	esv2527637	chr3:24090223-24091668	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv2357667	chr3:24090605-24091257	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3517830	chr3:24090621-24091119	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv9492	chr3:24090661-24091147	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3461613	chr3:24090670-24091144	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv3487657	chr3:24090692-24091151	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv3487654	chr3:24090699-24091133	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv3487655	chr3:24090714-24091076	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
13	esv3461614	chr3:24090721-24091113	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
14	esv3461615	chr3:24090726-24091110	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
15	esv3487658	chr3:24090729-24091093	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
16	esv3461612	chr3:24090732-24091070	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
17	esv3376084	chr3:24090749-24091063	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
18	esv4063	chr3:24090768-24091122	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
19	esv3461611	chr3:24090771-24091050	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
20	esv3487656	chr3:24090786-24091043	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
21	esv3461616	chr3:24090787-24091055	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
22	esv3487659	chr3:24090787-24091055	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
23	esv3517831	chr3:24090787-24091055	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:24088200-24091400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr3:24088400-24091800	Enhancers	NHDF-Ad	bronchial
3	chr3:24088800-24091400	Enhancers	HSMMtube	muscle
4	chr3:24089800-24091600	Weak transcription	Psoas Muscle	Psoas
5	chr3:24089800-24092800	Weak transcription	A549	lung
6	chr3:24090800-24093600	Weak transcription	Ovary	ovary
7	chr3:24090800-24101400	Weak transcription	NHLF	lung

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