Variant report

Variant	rs570348621
Chromosome Location	chr7:112330277-112330278
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531436	chr7:111856171-112585407	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
2	nsv889055	chr7:112174089-112353440	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	esv3477467	chr7:112329242-112330534	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
4	esv3507605	chr7:112329319-112330470	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
5	esv3507607	chr7:112329326-112330523	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
6	esv3507603	chr7:112329376-112330422	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
7	esv3507604	chr7:112329425-112330383	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
8	esv3477468	chr7:112329429-112330381	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
9	esv3507608	chr7:112329429-112330381	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:112329000-112330600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr7:112329200-112330400	Enhancers	Placenta	Placenta
3	chr7:112329600-112330600	Enhancers	Fetal Intestine Large	intestine
4	chr7:112330000-112330600	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr7:112330200-112330600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr7:112330200-112332400	Weak transcription	Fetal Intestine Small	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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