The 2.0 version of rSNPBase

Variant report

Variant rs570381001
Chromosome Location chr1:61685308-61685309
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:61669200-61685800 Weak transcription Fetal Brain Female brain
2 chr1:61669200-61692400 Weak transcription Fetal Muscle Leg muscle
3 chr1:61669400-61691800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr1:61669600-61685800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr1:61669600-61686000 Weak transcription Brain Inferior Temporal Lobe brain
6 chr1:61669600-61692400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:61674200-61686200 Weak transcription Brain Cingulate Gyrus brain
8 chr1:61676600-61685800 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr1:61676600-61690000 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr1:61677600-61692400 Weak transcription Esophagus oesophagus
11 chr1:61677800-61685600 Weak transcription Fetal Stomach stomach
12 chr1:61679200-61692200 Weak transcription NHEK skin
13 chr1:61679600-61685800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr1:61679800-61687400 Weak transcription Fetal Brain Male brain
15 chr1:61680000-61720200 Weak transcription Fetal Muscle Trunk muscle
16 chr1:61680800-61687400 Weak transcription A549 lung
17 chr1:61681800-61686000 Weak transcription Brain Substantia Nigra brain
18 chr1:61682000-61686200 Weak transcription Brain Anterior Caudate brain
19 chr1:61682000-61687400 Weak transcription Fetal Lung lung
20 chr1:61682000-61690200 Weak transcription Ovary ovary
21 chr1:61682000-61692400 Weak transcription Left Ventricle heart
22 chr1:61682000-61706800 Weak transcription Gastric stomach
23 chr1:61682200-61686000 Weak transcription HepG2 liver
24 chr1:61682200-61691800 Weak transcription Stomach Smooth Muscle stomach
25 chr1:61683600-61687200 Weak transcription Brain Hippocampus Middle brain
26 chr1:61683800-61685800 Weak transcription Colon Smooth Muscle Colon
27 chr1:61683800-61686200 Weak transcription Rectal Smooth Muscle rectum
28 chr1:61683800-61692400 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr1:61684000-61685600 Weak transcription Brain Germinal Matrix brain
30 chr1:61684000-61685800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:61684000-61687400 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr1:61684000-61690000 Weak transcription Adipose Nuclei Adipose
33 chr1:61684200-61685800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr1:61684200-61685800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr1:61684200-61686200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr1:61684200-61690200 Weak transcription Psoas Muscle Psoas
37 chr1:61684400-61692400 Weak transcription K562 blood
38 chr1:61685000-61687200 Weak transcription Liver Liver
39 chr1:61685000-61688600 Enhancers Cortex derived primary cultured neurospheres brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015