Variant report

Variant	rs570417034
Chromosome Location	chr2:63622831-63622832
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3417336	chr2:62957866-63749654	Strong transcription Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	nsv1006848	chr2:63061816-63631407	Weak transcription Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
3	nsv535768	chr2:63413596-63631407	Weak transcription ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	esv1800788	chr2:63473443-63900292	ZNF genes & repeats Enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
5	nsv834241	chr2:63490262-63668205	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	nsv1002047	chr2:63584797-63648782	Enhancers ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	nsv874234	chr2:63606001-63666590	Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
8	nsv874235	chr2:63622470-63709708	Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:63572000-63624000	Weak transcription	Left Ventricle	heart
2	chr2:63595200-63631200	Weak transcription	Skeletal Muscle Male	skeletal muscle
3	chr2:63597800-63649200	Weak transcription	Fetal Lung	lung
4	chr2:63598800-63631200	Weak transcription	Dnd41	blood
5	chr2:63599000-63631000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr2:63599400-63631200	Weak transcription	Aorta	Aorta
7	chr2:63599400-63631600	Weak transcription	Pancreas	Pancrea
8	chr2:63599800-63631200	Weak transcription	Thymus	Thymus
9	chr2:63605000-63642400	Weak transcription	HSMMtube	muscle
10	chr2:63605600-63631200	Weak transcription	Brain Inferior Temporal Lobe	brain
11	chr2:63605800-63624800	Weak transcription	Primary T cells from cord blood	blood
12	chr2:63605800-63631200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
13	chr2:63606000-63632800	Weak transcription	Skeletal Muscle Female	skeletal muscle
14	chr2:63607600-63631200	Weak transcription	Right Ventricle	heart
15	chr2:63615600-63631200	Weak transcription	Lung	lung
16	chr2:63615600-63637000	Weak transcription	Rectal Mucosa Donor 29	rectum
17	chr2:63615800-63637000	Weak transcription	Primary hematopoietic stem cells	blood
18	chr2:63620000-63631000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
19	chr2:63621000-63630000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr2:63621000-63630000	Weak transcription	Brain Anterior Caudate	brain
21	chr2:63621400-63637000	Weak transcription	Fetal Muscle Leg	muscle
22	chr2:63621600-63633000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
23	chr2:63621800-63625400	Strong transcription	Adipose Nuclei	Adipose
24	chr2:63622000-63624400	Strong transcription	Ovary	ovary
25	chr2:63622000-63625600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
26	chr2:63622000-63630800	Weak transcription	Duodenum Smooth Muscle	Duodenum
27	chr2:63622200-63623000	Strong transcription	Primary B cells from cord blood	blood
28	chr2:63622200-63645400	Weak transcription	Liver	Liver
29	chr2:63622800-63624200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
30	chr2:63622800-63626400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
31	chr2:63622800-63630800	Weak transcription	Stomach Smooth Muscle	stomach
32	chr2:63622800-63635600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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