Variant report
| Variant | rs57072643 |
|---|---|
| Chromosome Location | chr12:29746029-29746030 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:29709800-29756200 | Weak transcription | HMEC | breast |
| 2 | chr12:29716200-29764800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 3 | chr12:29726000-29751400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 4 | chr12:29731800-29769600 | Weak transcription | Hela-S3 | cervix |
| 5 | chr12:29736000-29752200 | Weak transcription | HSMM | muscle |
| 6 | chr12:29736800-29762800 | Weak transcription | Fetal Stomach | stomach |
| 7 | chr12:29737000-29748400 | Weak transcription | Spleen | Spleen |
| 8 | chr12:29737200-29746800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 9 | chr12:29737200-29748400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 10 | chr12:29737200-29761800 | Weak transcription | Right Ventricle | heart |
| 11 | chr12:29737200-29762400 | Weak transcription | Colon Smooth Muscle | Colon |
| 12 | chr12:29737200-29762800 | Weak transcription | Psoas Muscle | Psoas |
| 13 | chr12:29741000-29748200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 14 | chr12:29742600-29746200 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 15 | chr12:29742800-29750200 | Weak transcription | Aorta | Aorta |
| 16 | chr12:29742800-29752200 | Weak transcription | HSMMtube | muscle |
| 17 | chr12:29743200-29751800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 18 | chr12:29743200-29769800 | Weak transcription | NHLF | lung |
| 19 | chr12:29743600-29746200 | Enhancers | H1 Cell Line | embryonic stem cell |
| 20 | chr12:29744000-29746200 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 21 | chr12:29744400-29747600 | Weak transcription | Lung | lung |
| 22 | chr12:29744400-29790800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 23 | chr12:29744600-29747800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 24 | chr12:29744600-29749600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 25 | chr12:29744600-29752600 | Weak transcription | Left Ventricle | heart |
| 26 | chr12:29744600-29754200 | Weak transcription | Brain Anterior Caudate | brain |
| 27 | chr12:29744600-29765400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 28 | chr12:29744600-29791000 | Weak transcription | Fetal Muscle Leg | muscle |
| 29 | chr12:29744800-29747600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 30 | chr12:29744800-29749000 | Enhancers | Liver | Liver |
| 31 | chr12:29744800-29764600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 32 | chr12:29744800-29778200 | Weak transcription | Ovary | ovary |
| 33 | chr12:29745000-29746200 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 34 | chr12:29745000-29746400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 35 | chr12:29745000-29746400 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
| 36 | chr12:29745000-29749200 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 37 | chr12:29745200-29747600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 38 | chr12:29745200-29748200 | Weak transcription | Adipose Nuclei | Adipose |
| 39 | chr12:29745200-29751000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 40 | chr12:29745200-29751600 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 41 | chr12:29745200-29755000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 42 | chr12:29745200-29762000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 43 | chr12:29745400-29750000 | Weak transcription | Fetal Heart | heart |
| 44 | chr12:29745400-29752000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 45 | chr12:29745600-29747600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 46 | chr12:29745800-29746200 | Bivalent Enhancer | HUES64 Cell Line | embryonic stem cell |
| 47 | chr12:29745800-29747200 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 48 | chr12:29746000-29746200 | Bivalent Enhancer | HUES48 Cell Line | embryonic stem cell |
| 49 | chr12:29746000-29747000 | ZNF genes & repeats | Breast Myoepithelial Primary Cells | Breast |
| 50 | chr12:29746000-29751000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
