| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv471245 |
chr15:52607262-53187165 |
Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
52 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1041421 |
chr15:52661342-53148286 |
Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
51 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1046970 |
chr15:53065114-53142386 |
Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Enhancers Active TSS Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
10 gene(s)
|
inside rSNPs
|
n/a
|
| 4 |
nsv569428 |
chr15:53069874-53140045 |
Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
n/a
|
| 5 |
nsv1538 |
chr15:53110785-53148080 |
Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
n/a
|
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Last update: Aug 31, 2015