Variant report

Variant	rs57095745
Chromosome Location	chr4:160498330-160498331
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11930436	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11940195	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11943362	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11943672	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11944945	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11945017	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs55648243	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs56292641	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs56336757	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs57412754	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs57599247	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs57767373	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs58288302	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs58555248	0.90[EUR][1000 genomes]
rs72975967	0.90[EUR][1000 genomes]
rs72975973	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72975982	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72977811	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72977828	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72977836	0.90[EUR][1000 genomes]
rs73859177	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73859189	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73862104	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs73862107	0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015469	chr4:160389277-160841619	Enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv537316	chr4:160389277-160841619	Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	esv995513	chr4:160493535-160503286	Weak transcription Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:160479600-160506800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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