Variant report

Variant	rs570996522
Chromosome Location	chr7:99233625-99233626
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:99215464..99217026-chr7:99233198..99234980,2	K562	blood:
2	chr7:99223092..99225778-chr7:99231932..99235796,4	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv482532	chr7:99205906-99363886	Flanking Active TSS Enhancers Strong transcription Weak transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
2	nsv981815	chr7:99224245-99235459	Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
3	nsv970910	chr7:99232661-99234268	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:112 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:99215000-99236000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr7:99224000-99241800	Weak transcription	HSMMtube	muscle
3	chr7:99225400-99243000	Weak transcription	Fetal Brain Male	brain
4	chr7:99225800-99241800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
5	chr7:99228200-99244200	Weak transcription	Psoas Muscle	Psoas
6	chr7:99228400-99236000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr7:99228400-99258000	Weak transcription	Colon Smooth Muscle	Colon
8	chr7:99228400-99258800	Weak transcription	Ovary	ovary
9	chr7:99228800-99249000	Weak transcription	Small Intestine	intestine
10	chr7:99229000-99235800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr7:99229200-99241600	Weak transcription	Brain Angular Gyrus	brain
12	chr7:99229200-99242000	Weak transcription	NHDF-Ad	bronchial
13	chr7:99229200-99243200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr7:99229200-99267400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
15	chr7:99229200-99275000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
16	chr7:99229400-99236000	Weak transcription	Cortex derived primary cultured neurospheres	brain
17	chr7:99229400-99236800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
18	chr7:99229400-99257400	Weak transcription	Fetal Lung	lung
19	chr7:99229400-99257800	Weak transcription	Duodenum Smooth Muscle	Duodenum
20	chr7:99229600-99236200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
21	chr7:99229800-99235600	Weak transcription	Right Ventricle	heart
22	chr7:99229800-99235800	Weak transcription	Skeletal Muscle Male	skeletal muscle
23	chr7:99229800-99235800	Weak transcription	HSMM	muscle
24	chr7:99229800-99236000	Weak transcription	Skeletal Muscle Female	skeletal muscle
25	chr7:99229800-99241200	Weak transcription	Aorta	Aorta
26	chr7:99229800-99255400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
27	chr7:99229800-99257200	Weak transcription	Esophagus	oesophagus
28	chr7:99229800-99257600	Weak transcription	Pancreas	Pancrea
29	chr7:99229800-99260200	Weak transcription	Left Ventricle	heart
30	chr7:99229800-99272600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
31	chr7:99230000-99236000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
32	chr7:99230200-99236200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
33	chr7:99230200-99236200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
34	chr7:99230200-99243000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
35	chr7:99230200-99257200	Weak transcription	Gastric	stomach
36	chr7:99230400-99234200	Weak transcription	HUVEC	blood vessel
37	chr7:99230400-99235400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
38	chr7:99230400-99241800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
39	chr7:99230400-99243800	Weak transcription	NHLF	lung
40	chr7:99230400-99249000	Weak transcription	Colonic Mucosa	Colon
41	chr7:99230400-99257600	Weak transcription	Rectal Smooth Muscle	rectum
42	chr7:99230400-99272000	Weak transcription	Primary T helper cells PMA-I stimulated	--
43	chr7:99230600-99243400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
44	chr7:99230800-99241600	Weak transcription	Liver	Liver
45	chr7:99230800-99243200	Weak transcription	Thymus	Thymus
46	chr7:99230800-99258000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
47	chr7:99231000-99235000	Weak transcription	HUES48 Cell Line	embryonic stem cell
48	chr7:99231400-99241200	Weak transcription	Brain Inferior Temporal Lobe	brain
49	chr7:99231400-99248800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
50	chr7:99231600-99236600	Weak transcription	HUES64 Cell Line	embryonic stem cell

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