Variant report

Variant	rs571047509
Chromosome Location	chr8:125755777-125755778
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:125755220..125757743-chr8:125826134..125827699,2	MCF-7	breast:
2	chr8:125751576..125753119-chr8:125754133..125756960,2	MCF-7	breast:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891434	chr8:125630655-126324432	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
2	nsv1016502	chr8:125657664-125845074	Weak transcription Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	19 gene(s)	inside rSNPs	diseases
3	nsv891435	chr8:125747374-125764361	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
4	nsv517427	chr8:125749707-125766271	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
5	esv275160	chr8:125755750-125761165	Flanking Active TSS Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:125752800-125756200	Enhancers	Fetal Intestine Small	intestine
2	chr8:125754000-125756200	Enhancers	Fetal Intestine Large	intestine
3	chr8:125755000-125756000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr8:125755000-125756000	Enhancers	Pancreas	Pancrea
5	chr8:125755200-125756000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr8:125755200-125756000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr8:125755200-125756000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr8:125755200-125756000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr8:125755200-125756000	Flanking Active TSS	HepG2	liver
10	chr8:125755200-125756000	Enhancers	HMEC	breast
11	chr8:125755200-125756000	Enhancers	HUVEC	blood vessel
12	chr8:125755200-125756000	Enhancers	Osteobl	bone
13	chr8:125755400-125755800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr8:125755400-125755800	Enhancers	NH-A	brain
15	chr8:125755400-125755800	Enhancers	NHDF-Ad	bronchial
16	chr8:125755400-125755800	Enhancers	NHEK	skin
17	chr8:125755400-125756000	Enhancers	Muscle Satellite Cultured Cells	--
18	chr8:125755400-125756000	Enhancers	Stomach Smooth Muscle	stomach
19	chr8:125755600-125755800	Enhancers	Duodenum Smooth Muscle	Duodenum
20	chr8:125755600-125756000	Enhancers	Rectal Mucosa Donor 31	rectum
21	chr8:125755600-125756200	Enhancers	Liver	Liver
22	chr8:125755600-125761000	Weak transcription	Stomach Mucosa	stomach

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