The 2.0 version of rSNPBase

Variant report

Variant rs571085723
Chromosome Location chr7:27658502-27658503
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27646800-27658800 Weak transcription Osteobl bone
2 chr7:27646800-27659600 Weak transcription H1 Cell Line embryonic stem cell
3 chr7:27647000-27660200 Weak transcription Small Intestine intestine
4 chr7:27648600-27659800 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr7:27649200-27659400 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr7:27651200-27658600 Weak transcription Muscle Satellite Cultured Cells --
7 chr7:27651600-27659200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr7:27651800-27674200 Weak transcription Hela-S3 cervix
9 chr7:27652400-27658600 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr7:27652400-27658600 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr7:27653200-27659400 Weak transcription Brain Hippocampus Middle brain
12 chr7:27654400-27658600 Weak transcription Brain Substantia Nigra brain
13 chr7:27654400-27658600 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr7:27654400-27696400 Weak transcription Gastric stomach
15 chr7:27655200-27660400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr7:27655400-27665200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr7:27655600-27658800 Strong transcription Primary T cells from cord blood blood
18 chr7:27655600-27658800 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
19 chr7:27655600-27658800 ZNF genes & repeats Fetal Muscle Leg muscle
20 chr7:27655600-27659200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr7:27655600-27660600 ZNF genes & repeats Fetal Intestine Small intestine
22 chr7:27655800-27658800 Strong transcription Ovary ovary
23 chr7:27656200-27658600 Weak transcription Pancreas Pancrea
24 chr7:27656200-27658600 Weak transcription Psoas Muscle Psoas
25 chr7:27656200-27658600 Weak transcription Thymus Thymus
26 chr7:27656400-27658600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr7:27656400-27659600 Weak transcription HUES48 Cell Line embryonic stem cell
28 chr7:27656400-27659600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr7:27657000-27658800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr7:27657000-27660200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
31 chr7:27657000-27660400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr7:27657200-27658800 ZNF genes & repeats Primary hematopoietic stem cells blood
33 chr7:27657200-27658800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr7:27657200-27662200 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
35 chr7:27657400-27658600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
36 chr7:27657400-27658800 ZNF genes & repeats Fetal Stomach stomach
37 chr7:27657400-27659000 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr7:27657400-27661800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr7:27657400-27661800 ZNF genes & repeats Fetal Intestine Large intestine
40 chr7:27657400-27662600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
41 chr7:27657800-27658800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr7:27657800-27658800 ZNF genes & repeats HSMM muscle
43 chr7:27657800-27659000 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
44 chr7:27657800-27660000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr7:27657800-27660000 ZNF genes & repeats Fetal Muscle Trunk muscle
46 chr7:27657800-27660200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr7:27658000-27658800 ZNF genes & repeats Placenta Placenta
48 chr7:27658000-27659800 ZNF genes & repeats NHDF-Ad bronchial
49 chr7:27658000-27661400 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
50 chr7:27658200-27659000 ZNF genes & repeats Brain Anterior Caudate brain

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Last update: Aug 31, 2015